Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0841 ATGTATGGTGGTGACGAAGTATCGGCAATTGTGGTTGACTTGGGCTCCCACACTTGCAAAGCCGGTTACGCCGGCGAAGATGCTCCCAAGGCCGTTTTTCCCTCCGTTGTTGGAGCAATTGATCAAATGGACATTGATGAACCTGATAATACTGAAAAGAACTCTGCTTCTGCGGATTCAAAAAACAACACTAGAAATCCTGATTCTGACAAAACTAAAGGAAAACGCAAGTTGTATGTAGGATCACAGTCCTTGGGATACCGCAGAGACCATATGGAGGTGTTATCACCGTTGAAAGATGGAATTGTTGCTGACTGGGATATTGTTGATAGCATATGGGATCATGCTTTCAGAGAATGCCTTTTGATGGATCCTAAAGAGCATCCGATGCTACTTGCAGAACCTTCTTCTAACACTCAACAACAGAGAGAAAGGACAGCAGAACTGATGTTTGAGAAGTACAAAGTACCTGCTTTGTTTCTGGCCAAGAATGCTGTTCTTACATCTTTTGCATCAGGGCGTGCCACAGCATTAGTTGTTGATGGTGGTGGAGGATCAACTACTGTTGCACCTGTCCATGATGGTTATGTTCTTCAAAAGGCAGTTGCAACTTCTCCTATTGGAGGAGAGTTTCTTACGGATTGCTTGATGAAAAGTTTGGAAAGCAAAGGTATTGTGATAAAACCCCGGTATTCATTTAAGAGAAAGGAAATCCGGCCTGGAGAGTTTCAGACTGTAGATGTTGATTTTCCCAATACAACTGAAAGCTACAAACTTTACTCCCAGCGGGTGATTGCTAGTGATATCAAGGAATGTGTGTGCCGAGCTCCTGATACTCCATATGATGAGAGGGCATACTCAAACATTCCGATGACCCCATATGAACTTCCTGATGGCCAGACAATTGAAATCGGAGCTGATAGATTCAAGATTCCAGATGTTCTTTTTAATCCATCCCTGGTCCAGACTATTCCTGGCATGGAGAGCTATGCAGAGATTGCTCCTTCAGTTCGAGGTCTGCCTCAGATGGTTATAGAGAGTATTAACAAGTGTGACGTGGACATCCGAAGAGAATTATTTAGTAGCATACTGCTTGCTGGTGGTACGGCTTCAATGCAACAATTGAAGGAACGCCTTGAGAAAGACTTATTAGAGGAATCCCCTCAAGCTGCTAGAGTAAAAGTGCTGGCTAGTGGAAATTCAACTGAAAGGAGGTTCAGTGTGTGGATAGGTGGAAGCATATTGGCTTCTCTTGGCTCCTTCCAGCAAATGTGGTTTTCCAAGTCTGAGTATGAAGAGCATGGAGCTTCTTACATACAAAGAAAATGCCCATGA 1335 0.4367 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDEPDNTEKNSASADSKNNTRNPDSDKTKGKRKLYVGSQSLGYRRDHMEVLSPLKDGIVADWDIVDSIWDHAFRECLLMDPKEHPMLLAEPSSNTQQQRERTAELMFEKYKVPALFLAKNAVLTSFASGRATALVVDGGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGIVIKPRYSFKRKEIRPGEFQTVDVDFPNTTESYKLYSQRVIASDIKECVCRAPDTPYDERAYSNIPMTPYELPDGQTIEIGADRFKIPDVLFNPSLVQTIPGMESYAEIAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNSTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0841 444 CDD NBD_sugar-kinase_HSP70_actin 96 203 - -
Lele44g0841 444 SUPERFAMILY Actin-like ATPase domain 173 443 IPR043129 -
Lele44g0841 444 Gene3D Actin; Chain A, domain 4 209 322 - -
Lele44g0841 444 MobiDBLite consensus disorder prediction 44 75 - -
Lele44g0841 444 FunFam Actin-related protein 4 1 182 - -
Lele44g0841 444 Gene3D - 183 383 - -
Lele44g0841 444 Gene3D - 3 182 - -
Lele44g0841 444 Pfam Actin 4 443 IPR004000 -
Lele44g0841 444 Gene3D - 388 444 - -
Lele44g0841 444 SMART actin_3 7 444 IPR004000 -
Lele44g0841 444 PANTHER ACTIN 9 437 IPR004000 -
Lele44g0841 444 FunFam actin-related protein 4 386 444 - -
Lele44g0841 444 SUPERFAMILY Actin-like ATPase domain 5 180 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0841 Lele-ChrLele44 12869509 12878403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0841 1 443 Cytoskeleton Gene Families AT5G09810 37.220 4.89e-93 284