Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0836 ATGAAGTGCTTTTACTATTTCAAAGATAAATACAAGAGCAGAGGACAAAGATCAGCACCTGTGCTGAAAGAGCAAGATAAATCCCATTTTTCAAAAGCTGATAGAATCACCAAATCTGCATGTTCCACAGCCTCCACTCGTAGTATACCAGAATTGTATGAGGAGAGGGCTCATAATTTGCGGGTTTTCTCTTTCACGGAGCTCAGGCGTGCGACAAATGATTTCAATAGGCTTTTTAAGATAGGGGAAGGTGGATTTGGTAGTGTATATAAAGGTTCAATTCAGCCACTTGATGGAAAAGGATATCCTGTTTTAGTTGCCATCAAAAGGCTGAACAAGGATGGATTACAGGGTCATAAACAATGGTTGGCTGAAGTTCAGTTTCTTGGTGTTGTGGAGCACCCAAATCTCGTCAAACTCATTGGATACTGTGCGGTGGATGGCGAAAGAGGGATTCAAAGACTACTTGTATATGACTATATGCCAAATAAAAGCTTAGAACATCATCTTTTTCATAGGGCATATGATCCTCTTGCTTGGAGAATAAGACTTGAAATACTTCTTGGAGCAGCTCAGGGCTTAGCTTATTTGCATGAAGAATTAGAAGTTCAGATAATATACCGAGATTTCAAGTCTTCAAACGTGTTATTAGATGAAAACTTCAAGCCAAAACTTTCTGATTTTGGACTTGCTAGAGAGGGCCCAATTGCTGGCAATACTCATGTTTCGACTGCGGTTGTTGGTACATTCGGGTATGCTGCTCCAGATTATGTTGAGACGGGCCATCTCACTGCAAAGAGCGATGTGTGGAGTTTTGGTGTGGTTCTGTACGAAGTTCTTACGGGTAGGCGATCACTGGAGAGAAACCGGCCGAAAATGGAGCAGAAACTCTTGGAATGGGTGAAACACTATCCTGCTGACAGCAAAAGATTCAGCTTGATCATGGATCCACGACTCGAAGGGCAATATTCTCACAAGGCGGCTCAAAAAATTGCCAAGCTTGCTGACAATTGCCTTAGCAAGAGCGCAAAAGAGAGGCCGACAATGAGCCAGGTGGTAGAGAGATTGAAGCAGATAATCCAAGCTTCAGACGAAGAAAGTGTTTCAGAGCCAAGCTTCAAAGTATCCGAAGGTGACCCACCTGAGCCGGTAGAAAAATCAGATGAATCTGGACCTTCAGAATTGTATAAAAAGAGGATGGCTCATCTTGCAAAGCTTGGTGAACATGTTGAGAGTGGTAGTAGAAGAAGATTTATGATCCCGCAGAAGGGTTAA 1275 0.4267 MKCFYYFKDKYKSRGQRSAPVLKEQDKSHFSKADRITKSACSTASTRSIPELYEERAHNLRVFSFTELRRATNDFNRLFKIGEGGFGSVYKGSIQPLDGKGYPVLVAIKRLNKDGLQGHKQWLAEVQFLGVVEHPNLVKLIGYCAVDGERGIQRLLVYDYMPNKSLEHHLFHRAYDPLAWRIRLEILLGAAQGLAYLHEELEVQIIYRDFKSSNVLLDENFKPKLSDFGLAREGPIAGNTHVSTAVVGTFGYAAPDYVETGHLTAKSDVWSFGVVLYEVLTGRRSLERNRPKMEQKLLEWVKHYPADSKRFSLIMDPRLEGQYSHKAAQKIAKLADNCLSKSAKERPTMSQVVERLKQIIQASDEESVSEPSFKVSEGDPPEPVEKSDESGPSELYKKRMAHLAKLGEHVESGSRRRFMIPQKG 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0836 424 Gene3D Phosphorylase Kinase; domain 1 47 160 - -
Lele44g0836 424 CDD STKc_IRAK 81 359 - -
Lele44g0836 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Lele44g0836 424 MobiDBLite consensus disorder prediction 362 397 - -
Lele44g0836 424 PANTHER OS01G0588500 PROTEIN-RELATED 39 360 - -
Lele44g0836 424 Pfam Protein kinase domain 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0836 424 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 161 369 - -
Lele44g0836 424 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0836 424 Gene3D Transferase(Phosphotransferase) domain 1 161 376 - -
Lele44g0836 424 SUPERFAMILY Protein kinase-like (PK-like) 57 356 IPR011009 -
Lele44g0836 424 MobiDBLite consensus disorder prediction 379 397 - -
Lele44g0836 424 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0836 Lele-ChrLele44 12221313 12225587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0836 1 390 Glycoside Hydrolase AT3G07070 41.872 2.14e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele44g0836 Pkinase 5.4e-45 CL0016