Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0798 ATGAAATTAGATGATGTACAGGAATCTATGTACTCCTTAATGTATGAAGGCAATGCAGTCATCTTTATTCAACTTGTGGAACATATCTTCACTGGTGTATTCCTTAAAGTTAACAAAGCCACAGTGAACATGCTGCATAGAGTTGAACCTTATGTGACTTATGGATACCCAAATCTAAAGAGTGTTAGAGAACTTATTTACAAGAGAGGTTATGCGCAATCTGTGGTCACCATGACGAAGTTTTCCTCTCTAGTTTCTAATCAGATTCGGTTCCTGCTTCAGAGCTTGAACGAAGTCAACTTCGACTCTATTTTCCAGGAACTTTGTCAGTTCACTGAATATGGAACCGATGGAAGCATTTTACTCCTGCAAACATGCTTGGATCACCTGAATTTTGTCAGAAGTGATCTAAAGGACATGTCTCAGGTGCCTATTCTTGCAGCAGTCACTAAGTACCTCTTGGATAAACCTAACTTCAGTACGGTATTTTCTGAGTCACTGAAGACTATAGAAATCAGTGAAAGCTTCCTAGAAAAGTTTTCTAGTGGATTGCAGTTGTCTTTATTGGAGAAAATAACTATTGGTCTTGCTTTATCTGATTCTCACAATGTTGACACTAGGCTTTGTGGCAAGAACTTTTGTGTGGCTCAGATTGAGGAACTTTGTGCCAATCCTACCTCTTTGAGTTGTTCTGAGAGAATTCAAAATATTGTCATGTCCCTAAATTGCACTGAGGGCCTTTCCAAGCATGTGGATTCCTTTATGCAGATGTTATCGTTATTCCAGTTAAAAGAAACACCACCTTTTGTTTTGACTCCGTTGCTGCCTGATGATGTGCATGATCCAAACTTCTTAAGGTGGAATATGGAACTTTTCCACAAGGGTGAAGAGAATGACTTTGATGCTATTTTAGCTGACATACAGAAGGAAATGAACATGGGGGATATTGTGAAGGAACTGGGATATGGGTGCACTGTCAGCACCTCACAGTGCAGGGAAATTTTCTCACTTTTCTTACCTTTAACTGAGGATACCCTTGCTAAATTACTTGGTTCTATTGCTCGAACTCATGCTGGGATGGAGGACAATCAGAGTTCATTCTTAAATTTTAGCATGGCCCTTGGTTATAGCACTTTGTCTGAGTTGCCGCCACTGAATTCTTGGAATATTGATGTGCTGATTGATACGATCAAGCATCTGGCACCTGGAATTAATTGGACAAGTATAGTTGAGAATCTTGATCATGAAGGCTTTTTTGTTCCTAGTGAAGAAGCTTTCTCCTTTCTCATGTCTGTATATAAGCATGCCTGCAAGGAACCTTTTCCTCTTAATGCCATTTGTGGGTCTGTCTGGAAGAATGCTGAGGGCCAGCTATCTTTTCTTAAATTTGCTGCATCAGCACCACCAGAAGTATTTACCTTTGCTCCCTCTGCCAGGCAGTTGGAGTATGTTGATGCAATTCATGGCCACAAACTTCAATCTGGACATGCAAATCATGCTTGGTTGTGTCTGGACTTGTTGAATGTATTATGCCAGCTAGCTGAAAGGGGTCATGCTGGTTCTGTTAGATCAGTCCTTGATTATCCTCTTAAGCACTGTCCTGAAATCTTGCTTCTTGGGTTGGCACATATTAATACTACGTACAACCTTATCCAACATGAACTGTCTCTGATTGTTTTCCCCATGATGTTAAGAAATGTGGTTGGCAGTGGTATGATTCAGCACCTTTGGCATGTTAATCCCAATCTGATATTGCGGGGTATTGTAGATTCTCAAAACAATGACATTGAGAGCAGCATAAGAATTGTGGACATCTGCCAAGAGCTAAAGATTCTACAGTCAATATTGGAGATCATTCCTACTTTTTCTAGTATAAGGTTGGCTGCCATTGCCTCAAGAAAAGAATTTCTTGATCTTGAGAAGTGGTTGGTTAGTAATCTAACTATTCACAAAGATGTCTTTTTTGAGGAGTGCCTCAGGTTCTTGAAAGATACTTATTTTGCGGGTTCACAGAACTTGTCTAGCAAATCTTTTCATCAGTCTACTGTTCTGAATCTTTATGTTGAGACGGCACCTACTTTCTTGAAGGTTCTTAAAAGCCAATCTGGCTTGATTTGCTCTAGCCAACTTTCTGAGGAGCTGGAAAGGTTGCATGGATCTATTATGGACTCAAATCCAAGGCTGCAAAGCAGTGGTGCTGCTGATTCATCCTCTGATGGATATGCAGATGACATTGAGACAGAAGCAAATTCATACTTTCATCAGATGTTTTCTAGTCAGTTAACCATTGATGCGATGGTTCAGATGCTTGCTCGATTCAAAGAATCTTCTGTGAAGAGGGAACAATCAATTTTTGAGTGTATGATAGCAAATTTGTTTGAGGAGTATAGGTTTTTCCCAAAGTATCCTGAGATGCAACTCAAAATTGCAGCAGTCCTCTTTGGTTTTGGGGTAGACCTAAGGAAGCTTGAGAATCCACCCTTAGAAGCAAGGACTGTATCTTAA 2505 0.4012 MKLDDVQESMYSLMYEGNAVIFIQLVEHIFTGVFLKVNKATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYAQSVVTMTKFSSLVSNQIRFLLQSLNEVNFDSIFQELCQFTEYGTDGSILLLQTCLDHLNFVRSDLKDMSQVPILAAVTKYLLDKPNFSTVFSESLKTIEISESFLEKFSSGLQLSLLEKITIGLALSDSHNVDTRLCGKNFCVAQIEELCANPTSLSCSERIQNIVMSLNCTEGLSKHVDSFMQMLSLFQLKETPPFVLTPLLPDDVHDPNFLRWNMELFHKGEENDFDAILADIQKEMNMGDIVKELGYGCTVSTSQCREIFSLFLPLTEDTLAKLLGSIARTHAGMEDNQSSFLNFSMALGYSTLSELPPLNSWNIDVLIDTIKHLAPGINWTSIVENLDHEGFFVPSEEAFSFLMSVYKHACKEPFPLNAICGSVWKNAEGQLSFLKFAASAPPEVFTFAPSARQLEYVDAIHGHKLQSGHANHAWLCLDLLNVLCQLAERGHAGSVRSVLDYPLKHCPEILLLGLAHINTTYNLIQHELSLIVFPMMLRNVVGSGMIQHLWHVNPNLILRGIVDSQNNDIESSIRIVDICQELKILQSILEIIPTFSSIRLAAIASRKEFLDLEKWLVSNLTIHKDVFFEECLRFLKDTYFAGSQNLSSKSFHQSTVLNLYVETAPTFLKVLKSQSGLICSSQLSEELERLHGSIMDSNPRLQSSGAADSSSDGYADDIETEANSYFHQMFSSQLTIDAMVQMLARFKESSVKREQSIFECMIANLFEEYRFFPKYPEMQLKIAAVLFGFGVDLRKLENPPLEARTVS 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0798 834 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 732 815 IPR032193 -
Lele44g0798 834 Gene3D - 729 830 IPR038535 -
Lele44g0798 834 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 557 699 IPR032194 -
Lele44g0798 834 Gene3D - 24 95 IPR036919 -
Lele44g0798 834 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 103 815 IPR040398 GO:0017148|GO:0030015
Lele44g0798 834 SUPERFAMILY Ribosomal protein L30p/L7e 28 71 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0798 Lele-ChrLele44 8710196 8717015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0798 26 73 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 83.333 1.02e-20 90.5