Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0794 ATGCTCACTGGAAACGACGAAGCTGCCGCAGCAGAATCCGAACAGAAGCACCGGCAAATCTTCGACCACTACAATTCTCACCCGTTCTTACCCGACCACCTTATTTCTCAAGTTCCACCGGTACCCACACCGACCACCACCACCACCTCTGATTTCTCTCTTGTAAGACACCATCAACAATTTCACTTGCAACCCTGTAACCATATCCACCACCAACAACAACAACATTCTCTCTTCGACATACGCGCCTTCTCCGTCGCGTCGTCCTCGGATTTCCCTCCGCCACAACCACAACCATCGGCACAGTCACATCATTCCATGTTCTCCCTTGACCCACTCCCTCGGGTCAACGCCGGTAACTGTAGGCCTGGTGGTGGGCTTCTTTTGGTGCCCAAGTCTGAGGATGTGGGTCGGTCCATGGACTTCTCGGCGTCTCGAATTGGACTCAACCTCGGCGGCCGAACGTACTTCTCCAGCTCCGAGGACGACTTCGTGAGCCGGCTCTACAGCCGGCCCCGGCAGTTAGAACCAGGCTCGACGATGTCATTCAACAACTCCTCGCCGAGATGCCAAGCTGAGGGATGCAATGCCGATCTCTCTCACGCGAAGCACTATCACCGCCGACACAAGGTGTGCGAGTTTCACTCCAAGGCTGCCACCGTCATAACCGCCGGGTTGACTCAGCGATTCTGCCAGCAATGTAGCAGAACCCTTTCACCACCATGCCTCTTCTCTGAGGCACTCAATCATATGCAATGGGAAGACCGAGAAGATGAGTGTAACCCTGATGTCAAAGACGAAAATACCCCTGTGATACTAGCAAAGCAGTCATAG 834 0.5408 MLTGNDEAAAAESEQKHRQIFDHYNSHPFLPDHLISQVPPVPTPTTTTTSDFSLVRHHQQFHLQPCNHIHHQQQQHSLFDIRAFSVASSSDFPPPQPQPSAQSHHSMFSLDPLPRVNAGNCRPGGGLLLVPKSEDVGRSMDFSASRIGLNLGGRTYFSSSEDDFVSRLYSRPRQLEPGSTMSFNNSSPRCQAEGCNADLSHAKHYHRRHKVCEFHSKAATVITAGLTQRFCQQCSRTLSPPCLFSEALNHMQWEDREDECNPDVKDENTPVILAKQS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0794 277 Pfam SBP domain 190 236 IPR004333 GO:0003677
Lele44g0794 277 MobiDBLite consensus disorder prediction 88 108 - -
Lele44g0794 277 ProSiteProfiles Zinc finger SBP-type profile. 187 264 IPR004333 GO:0003677
Lele44g0794 277 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 75 236 IPR044817 GO:0003677
Lele44g0794 277 MobiDBLite consensus disorder prediction 258 277 - -
Lele44g0794 277 SUPERFAMILY SBT domain 188 237 IPR036893 GO:0003677|GO:0005634
Lele44g0794 277 Gene3D - 185 245 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0794 Lele-ChrLele44 8351126 8352221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0794 128 240 SBP-box Gene Family AT1G02065 69.912 1.31e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele44g0794 SBP 1.8e-17 No_clan