Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0793 ATGGCGGAGACCTCGGCGGCGGCGGCCGGCGCCACCACTTGCCACGAGCCCGTCCTCGCAAACGCGCTCATGTTTCTTCCTCCTACTCAGGCTAGTAGTAGTACTGCCGCTAATCGTGACCACGACAACGGCCGCGTTGACCTTGGTGGCCAACATCATCAACGACCGCAACAACAGCAGGAGGCATTGTACTCCGGCGCTGGGGCGCACGTGCATCTGGACCCACATCTCATGTGCTTGAAGCTGGGGAAGAGGCATTATTTTGAGGACGCTAATGCTCCTCCTCTTGGCGGCGGCGTAGGAGGAGGCGGAGTCGGCGGTGGGTTTGCTTTAGCCGGAAAGAGAGGGAGAGGAGGGTTCTATGGAGGAGGCAGTGTGAAGACAGCGACGGCGGCAACACCGACGACGACGGTGCCGAGGTGTCAGGTGGAGGGATGCCAGGTGGCACTGCTGAACGCGAAGGAGTACCACCGGAGACACAAAGTTTGTGAGATGCATTCCAAGGCACCGAAGGTTGTAGTGTTAGGGTTGGAGCAGAGATTTTGTCAACAGTGTAGCAGGTGA 564 0.5904 MAETSAAAAGATTCHEPVLANALMFLPPTQASSSTAANRDHDNGRVDLGGQHHQRPQQQQEALYSGAGAHVHLDPHLMCLKLGKRHYFEDANAPPLGGGVGGGGVGGGFALAGKRGRGGFYGGGSVKTATAATPTTTVPRCQVEGCQVALLNAKEYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0793 187 ProSiteProfiles Zinc finger SBP-type profile. 138 187 IPR004333 GO:0003677
Lele44g0793 187 SUPERFAMILY SBT domain 139 187 IPR036893 GO:0003677|GO:0005634
Lele44g0793 187 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 38 187 IPR044817 GO:0003677
Lele44g0793 187 Pfam SBP domain 141 187 IPR004333 GO:0003677
Lele44g0793 187 Gene3D - 137 187 IPR036893 GO:0003677|GO:0005634
Lele44g0793 187 MobiDBLite consensus disorder prediction 30 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0793 Lele-ChrLele44 8201747 8202310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0793 78 187 SBP-box Gene Family AT1G27360 47.273 2.11e-22 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele44g0793 SBP 1.1e-17 No_clan