Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0773 ATGAACTCGTTTCGCAAAATCTTCTTCCGCCACGTTTCTACCGCCTGCACCACCACAAGTAAGCTCCTGAAATACTCAAAAATACCCAAAAGGTACCAAAAATTCGCTGTCCGTGAAGCCCAGAAAGTCCTCACCGATTATCTCCACGAAACTAGATGCTTACCTTTTGTATTGGCGGATCAGATTGGCAAGAACTCCCTCCTTTCCCTCGTTAATCTCATTGTGAAGGTGGACTTCTCTGCCTCCACTTTCTCGAGAAATTTCGAGAAATACCTCAGGTACCACCCCATCGATGAGTTCGAATTTTTCTTTGAAAGCATAGGCATAGACTGCAATAATTGCGTTTCTGAGTCGTTGCCTGCTAATAAGGTCTTCTTTTCTGAAGATGGATCAATTCTGGATGCAGCTTGTGTGCTTTCGGGTTTTGGGTTTCCGTGGGATAAGTTGGGTAAGTTGTATAAGGAATGCAGTTCCACTTTCAGGAGAAGTCCCAATGAGTTGGAGTCTAAACTCTGTGACTTTAAGAAACATGGCTTTGGTAATGTTGAAGTGGTTGGTATATGTCTAGCTTTCCCCAATATCTTAGGTGAGGAAGGTGATGGTGAAATTGATGGTCTGTTTACTGATCTGAAATCAGTACTTTTAGATTTTGAATTGGCAAAATCTGTTGAAGGAAATATAGATTCTTGGCATGAAGTATGTAGAAAAATTCGGGTGTTCTATAATTTAAAAGGTGAGAAGGGAAAGTTAGGGGAGCTCATGGGAAGGGCAAAAACCATCTTTATTGAATATGGAGAAGATGAGTTGATTCAAAAAGCAGAGTATTTCTGTAGATTTGGTGTCAAAAAACAGGAAGTAGCACTTTTACTTTTAAAAGCCCCAGAGTTGTTGGATCTTGATTTGGAGATGTCAGTGATTAATGTATCAAAGCTATTGAAACACTTTGGCTTGAGCCCTAAAATTTTGGAGGATGTTAGTAAAAAATATGATCATGTATTGGGGACGAACAAGATGGATAATCTGCCTAATGTAGTGAGAGCTTTGGATTTACATGAGTGGTTCTTCAATAAAATGAAGGATGGAAATCATAAGTTGTTGATAAGTTATCTTGCAAACCATCCTAATGAAGACCAGGATAAAGAATATCAAGCTGGCTTAGAGATTATATGTGTTTCAAGTTCCCAAAATCATAGAATGAGTAAATTGAATTTCTTGCATGGCTTGGGCTTTGGAGAAAATGCTTTAACTATAAATATTTCAGCTCGCTTGCATGGCTCTAATTGGGAGTTACAGAAAAGGTTTGAATTCCTTCTGCATTTAGGGTTTGAATTCTCAAAGCTCTGTATCATGGTGAAAAAAGCACCTAAAATTCTAAACCAAAAATCTCAAGTTGTAGATAAGAAGGTGAAATTCTTCTGTCAGGAAATGGGAATCCCTGTTCCGTGTTTGACCCCTTTGGCATCACTTTTGTATTATAATCTAGAGAACTGGATTAAGCCTAGGCACGGATTTCATATGTGGCTTGAAGAGAAGGGTCTGCTTGTAGAAAAGTATTCCATCATAACTGTGTTTGCTTGTAGTAACAATCGTTTTGTAGATATGGCTTATAACATTCACCCAGCTGCTCCAAAACATTGGCTTGAGCAATTCTACATACCTCTAAACACTCAGTGTTATAATCATTAA 1686 0.3849 MNSFRKIFFRHVSTACTTTSKLLKYSKIPKRYQKFAVREAQKVLTDYLHETRCLPFVLADQIGKNSLLSLVNLIVKVDFSASTFSRNFEKYLRYHPIDEFEFFFESIGIDCNNCVSESLPANKVFFSEDGSILDAACVLSGFGFPWDKLGKLYKECSSTFRRSPNELESKLCDFKKHGFGNVEVVGICLAFPNILGEEGDGEIDGLFTDLKSVLLDFELAKSVEGNIDSWHEVCRKIRVFYNLKGEKGKLGELMGRAKTIFIEYGEDELIQKAEYFCRFGVKKQEVALLLLKAPELLDLDLEMSVINVSKLLKHFGLSPKILEDVSKKYDHVLGTNKMDNLPNVVRALDLHEWFFNKMKDGNHKLLISYLANHPNEDQDKEYQAGLEIICVSSSQNHRMSKLNFLHGLGFGENALTINISARLHGSNWELQKRFEFLLHLGFEFSKLCIMVKKAPKILNQKSQVVDKKVKFFCQEMGIPVPCLTPLASLLYYNLENWIKPRHGFHMWLEEKGLLVEKYSIITVFACSNNRFVDMAYNIHPAAPKHWLEQFYIPLNTQCYNH 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0773 561 Pfam mTERF 139 346 IPR003690 GO:0003690|GO:0006355
Lele44g0773 561 Pfam mTERF 423 531 IPR003690 GO:0003690|GO:0006355
Lele44g0773 561 PANTHER CGI-12 PROTEIN-RELATED 150 535 IPR003690 GO:0003690|GO:0006355
Lele44g0773 561 Gene3D Transcription termination factor 3, mitochondrial 366 547 IPR038538 -
Lele44g0773 561 Gene3D Transcription termination factor 3, mitochondrial 222 357 IPR038538 -
Lele44g0773 561 SMART mt_12 448 479 IPR003690 GO:0003690|GO:0006355
Lele44g0773 561 SMART mt_12 252 282 IPR003690 GO:0003690|GO:0006355
Lele44g0773 561 SMART mt_12 150 180 IPR003690 GO:0003690|GO:0006355
Lele44g0773 561 SMART mt_12 287 318 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0773 Lele-ChrLele44 7524409 7526094 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele44g0773 mTERF 3.5e-11 No_clan