Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0764 ATGAGTCGCAGGGTGAGGAGAAAGGTCGCAAGAAAAGGAAAAGAGAAAGTGGTCTTGCCAAGTTACCCTGACATTCAAGATGAGGTTTCGGATTCAGACACTGAACGTGTTGTTGATTGGAGGGGCTTGCCTGATGACACAGTAATTCAACTGTTTTCATGTCTTAGTTATCGTGACAGAGCAAGCTTATCATCAACTTGTAGGACATGGAGGCTTCTTGGTAGCTCTCCATGTTTATGGACTTCTCTTGATCTTCGCTCTCACAGGTTTGATGCCACCATGGCATCTTCACTGGCTCCAAGGTGTGTGCATCTTCAGAAGCTTAGATTTCGTGGGGCTGAATCTGCTGATGCGATAATTTATCTTCAAGCTAGGAATTTGCGTGAAATAAGTGGTGACTACTGCAGGAAGATTACTGATGCGACCCTTGCAGTAATTGTGGCCCGGCATGAGTTACTTGAGAGCCTTCAGCTTGGTCCAGATTTCTGTGAAAGAATCAGCAGTGATGCTATAAAAGCAATTGCTCATTGCTGTCCAAGGTTAAGGAAACTTAGACTCTCAGGCATTAGGGATGTAAGTGCTGATGCCATTAATTCGTTGGCTAAGCATTGTCCGAATTTGACTGATATTGGATTCATTGACTGTTTGAATATTGATGAGCTAGCATTGGGAAATGTGTTATCAGTTCGTTTTCTTTCCGTTGCGGGGACTTCAAGTATGAATTGGGTTGTAGTTTCTCATCTTTGGCATAAGCTGCCCAACCTTACTGGAATAGATGTTTCAAGAACTGATATTGGTCCATCTACTGTTTCGAGGTTGTTGTCAGCACAGAGATTGAAAGTTTTGTGTGCTCTGAATTGTTCTATACTTGAAGAGGACACCAGCTTCTCCACAAGTAAATACAAAAATAAGCTATTAATTGCCCTTTTTAATGATATTTTTAAAGGACTGGCTTCTTTATTTTTTGACGATACAAAGAATGGCAAGAATGTGTTTTTGGACTGGAGGAGCGTTAAGAACAATAACACGGACTTAAATGAACTTATGATCTGGCTTGAGTGGATCCTATCCCATACCCTTCTGCGATCTGCTGAGAGCTCTCCTCAACAGGGCCTAGAAAATTTCTGGGTTGAACAAGGTGGAGGACTCTTGCTTAGTCTAATGCAGAGCCCACAAGAGGATGTTCAGGAAAGGGCAGCCACAGGTCTTGCAACATTTGTTGTAATTGATGATGAAAATGCTAGCATTGACTGTGGAAGGGCTGAAGCAGTTATGCGTGATGGTGGCATACGGCTACTTCTTGGCTTGGCAAAATCATGGAGGGAGGGGCTTCAGTCTGAGGCAGCTAAGGCCATTGCAAATTTGTCTGTCAATGCCAATGTTGCAAAAGCTGTTGCAGAAGAAGGGGGAATTGATATTCTTGCTGGTTTGGCGAGATCCATGAACAAGCTGGTGGCTGAAGAGGCTGCTGGAGGATTGTGGAATCTCTCTGTTGGTGAAGAGCACAAGGGTGCAATTGCTGCGGCTGGTGGAATACAAGCATTAGTAGATCTTATATTCAAGTGGTCCTCCAGTGGGGATGGAGTTTTGGAACGTGCTGCTGGTGCGCTAGCTAATTTGGCAGCTGATGACAAGTGTAGTACAGAAGTTGCACTGGCTGGTGGTGTACATGCTTTAGTGATGCTTGCGCGTAGCTGCAAATTTGAGGGAGTGCAAGAGCAGGCTGCTCGTGCATTGGCTAATTTGGCTGCTCATGGAGATAGCAACAGTAACAATGCTGCTGTTGGACAAGAAGCAGGGGCTCTGGAGGCCCTTGTTCAACTTACACGCTCTCCTCACGAGGGGGTCAGGACGCCAAAGTATTTAAGGCAAGAAGCTGCTGGTGCACTTTGGAATTTGTCATTTGATGACAGGAATCGAGAAGCCATTGCAGCAGCTGGTGGAGTTCAGGCCTTGGTTGCTCTTGCACAATCTTGTTCTAACGCCTCCCCTGGACTTCAAGAGAGAGCTGCGGGTGCTCTCTGGGGATTGTCAGTTTCTGAAGCCAATAGGTAA 2055 0.4535 MSRRVRRKVARKGKEKVVLPSYPDIQDEVSDSDTERVVDWRGLPDDTVIQLFSCLSYRDRASLSSTCRTWRLLGSSPCLWTSLDLRSHRFDATMASSLAPRCVHLQKLRFRGAESADAIIYLQARNLREISGDYCRKITDATLAVIVARHELLESLQLGPDFCERISSDAIKAIAHCCPRLRKLRLSGIRDVSADAINSLAKHCPNLTDIGFIDCLNIDELALGNVLSVRFLSVAGTSSMNWVVVSHLWHKLPNLTGIDVSRTDIGPSTVSRLLSAQRLKVLCALNCSILEEDTSFSTSKYKNKLLIALFNDIFKGLASLFFDDTKNGKNVFLDWRSVKNNNTDLNELMIWLEWILSHTLLRSAESSPQQGLENFWVEQGGGLLLSLMQSPQEDVQERAATGLATFVVIDDENASIDCGRAEAVMRDGGIRLLLGLAKSWREGLQSEAAKAIANLSVNANVAKAVAEEGGIDILAGLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAAAGGIQALVDLIFKWSSSGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARSCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSPHEGVRTPKYLRQEAAGALWNLSFDDRNREAIAAAGGVQALVALAQSCSNASPGLQERAAGALWGLSVSEANR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0764 684 Gene3D - 504 590 IPR011989 -
Lele44g0764 684 Gene3D - 591 684 IPR011989 -
Lele44g0764 684 Pfam F-box-like 41 86 IPR001810 GO:0005515
Lele44g0764 684 SMART fbox_2 43 83 IPR001810 GO:0005515
Lele44g0764 684 SMART LRR_CC_2 178 203 IPR006553 -
Lele44g0764 684 SMART LRR_CC_2 124 149 IPR006553 -
Lele44g0764 684 SMART LRR_CC_2 204 229 IPR006553 -
Lele44g0764 684 SUPERFAMILY ARM repeat 372 679 IPR016024 -
Lele44g0764 684 Pfam Armadillo/beta-catenin-like repeat 500 542 IPR000225 GO:0005515
Lele44g0764 684 Pfam Armadillo/beta-catenin-like repeat 422 456 IPR000225 GO:0005515
Lele44g0764 684 Pfam Armadillo/beta-catenin-like repeat 553 584 IPR000225 GO:0005515
Lele44g0764 684 Pfam Armadillo/beta-catenin-like repeat 636 678 IPR000225 GO:0005515
Lele44g0764 684 Pfam Armadillo/beta-catenin-like repeat 463 497 IPR000225 GO:0005515
Lele44g0764 684 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 469 511 IPR000225 GO:0005515
Lele44g0764 684 Gene3D Ribonuclease Inhibitor 33 320 IPR032675 -
Lele44g0764 684 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 647 684 IPR000225 GO:0005515
Lele44g0764 684 ProSiteProfiles F-box domain profile. 37 83 IPR001810 GO:0005515
Lele44g0764 684 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 600 648 IPR000225 GO:0005515
Lele44g0764 684 SMART arm_5 589 635 IPR000225 GO:0005515
Lele44g0764 684 SMART arm_5 543 584 IPR000225 GO:0005515
Lele44g0764 684 SMART arm_5 417 457 IPR000225 GO:0005515
Lele44g0764 684 SMART arm_5 458 498 IPR000225 GO:0005515
Lele44g0764 684 SMART arm_5 636 679 IPR000225 GO:0005515
Lele44g0764 684 SMART arm_5 499 542 IPR000225 GO:0005515
Lele44g0764 684 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 554 585 IPR000225 GO:0005515
Lele44g0764 684 PANTHER PROTEIN ARABIDILLO 1 1 683 - -
Lele44g0764 684 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 510 555 IPR000225 GO:0005515
Lele44g0764 684 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 428 470 IPR000225 GO:0005515
Lele44g0764 684 Gene3D - 383 503 IPR011989 -
Lele44g0764 684 SUPERFAMILY RNI-like 38 292 - -
Lele44g0764 684 FunFam Protein ARABIDILLO 2 354 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0764 Lele-ChrLele44 7321735 7332115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0764 428 674 U-box Gene Family AT2G23140 32.400 7.79e-15 76.3