Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0762 ATGAGAGCAATAAAGGGGCGGCTTATAATGGAAATAAATGTTATATACTCTGAGCTAAGTAATTCTGCAAAGGAACACAACCCGCAGCCTGTAGTAGAGCAGTTTTTTAGTCTTCATGCAAGCCTAAATAATGCTCTCGTAGTTGCTGACTCCCTATCAAAAACCATTCCTAATGTCTTAACCAGAGAACCTCAATTGTCCAAGCTTCCAGCTTCAAGTAATGGTCAACATCAAAAGACTATCTTAGGAAGTCAGCCCATGTTAGTTCTAGAGAATGCCAATGAAGATTCTTCTTCAAAACTTCAGGTAAAAACACGTTCAGTGGCTAATTCTAAACACGCCTCGCAAGGAACTCCTTGTCAAAAAAGTGAGGGGTTAGCAAATGGACAAAAGCAGCTAGCTCAACCACCTCAACCTTGGGTTGAGGGAAATGGGCTTGATGAAGTAGTAAATTTAGCTGAAATGCTACAATCACGGTCCAGAAATTGGTTTTTGGGATTTGTGGAGAAATTCTTGGTTTTTGGGATTTTAGAAAGAAATTGTAGAAATTCATCAGTTCGTTCCGATTCTTCTTCGATCTCCATTCCATTCCAGAGCGCTGCCGTCGTTATCGTTGTCCGAGAAGGTTCGCGTCACTCCATTCTCATCTTCTGTCGTTCGATCTGCTACATTGAGGTGCGTTCTTCTCCCCTCCTTTCAGTTCTCCTTCGGTTTGGTCTTCTCTCTGTTTTGCGTTATGCTCTGGCTCATTGTTCTACTCTGGTTCCTGCTAGTCCGTCGTTCTCTTCAATTTTATCCACCAATTGCCGAATTGATTTGGTAGAAAGTCCTTGTAAGAGTGGAACCCTTTTTGATTCAAAAGAGATGGCTGGGCAATCTGATCCTCACCTCTCTCTGTTTTCAGCTGAAGAGCTTGAATTTGTGGCGGAGGATGACATGGTTGAGATTGTACCCAATCTCAAAATGAATGCTCTCAATCTGATAAGTGGAGATTTTGGTCCATTTGCCCCACAACTAGCTAATCAAGTGCCGTTGTGGTTGGCTGTGGCTTTGAAGAAGAGAGGAAAATGCTCTATTCGCCCTCCTGAATGGATGTCAGTTGATAATCTAACTCAAGTTCTGGAGGCCGAGCGGGAATCTCAGGAAATGTCTGAAAAATTACCATTTCATTATGTAGAAATCTCAAGACTTCTCTTTGATCATGCACGCGAAGACATTCCTGATGTATATATGGTGAGGTCTCTAATTGAAGATATTCGAGATGTAAGATTTCATAAAGTAAGGACTGACTTAGAGGCATTCAATGGTCGAACAGTTGCTGTCAAGATTAAGAATTTGTCGGCAATGGAGGTGAATATTGTTCGCCCATTTATTAGAAGAGCTTTACAGGCATTTTGTAAGCATGATAGTCCTGAGCTGATACCAGACCCAGAGAGAGTGGCTGACAAACGTCCACAATTAGTGAACAATGCTCCAAGAGCAATTGCGACGATGATGATCAACATCTCATCAAATATCATGACATGTGGCTGGCTTTGA 1539 0.4198 MRAIKGRLIMEINVIYSELSNSAKEHNPQPVVEQFFSLHASLNNALVVADSLSKTIPNVLTREPQLSKLPASSNGQHQKTILGSQPMLVLENANEDSSSKLQVKTRSVANSKHASQGTPCQKSEGLANGQKQLAQPPQPWVEGNGLDEVVNLAEMLQSRSRNWFLGFVEKFLVFGILERNCRNSSVRSDSSSISIPFQSAAVVIVVREGSRHSILIFCRSICYIEVRSSPLLSVLLRFGLLSVLRYALAHCSTLVPASPSFSSILSTNCRIDLVESPCKSGTLFDSKEMAGQSDPHLSLFSAEELEFVAEDDMVEIVPNLKMNALNLISGDFGPFAPQLANQVPLWLAVALKKRGKCSIRPPEWMSVDNLTQVLEAERESQEMSEKLPFHYVEISRLLFDHAREDIPDVYMVRSLIEDIRDVRFHKVRTDLEAFNGRTVAVKIKNLSAMEVNIVRPFIRRALQAFCKHDSPELIPDPERVADKRPQLVNNAPRAIATMMINISSNIMTCGWL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0762 512 SUPERFAMILY PriA/YqbF domain 300 359 - -
Lele44g0762 512 FunFam DNA replication complex GINS protein PSF2 366 480 - -
Lele44g0762 512 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 295 480 IPR007257 GO:0005634|GO:0006260
Lele44g0762 512 SUPERFAMILY GINS helical bundle-like 361 469 IPR036224 -
Lele44g0762 512 Pfam Plant protein of unknown function (DUF936) 15 175 IPR010341 -
Lele44g0762 512 MobiDBLite consensus disorder prediction 93 140 - -
Lele44g0762 512 Gene3D - 300 365 - -
Lele44g0762 512 Gene3D - 366 473 - -
Lele44g0762 512 CDD GINS_A_psf2 354 470 - -
Lele44g0762 512 FunFam DNA replication complex GINS protein PSF2 300 365 - -
Lele44g0762 512 MobiDBLite consensus disorder prediction 93 137 - -
Lele44g0762 512 Pfam GINS complex protein 342 450 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0762 Lele-ChrLele44 7279272 7293077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0762 289 435 Core DNA Replication Machinery Family AT3G12530 72.109 1.53e-76 236