Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0738 ATGAGAAAACTGAAAGTTTCTACAAAGCAACAGTCATCAGAACAAAGAAATCGTGCTTTTTCTTACTCCGATGTCCTTGAGATCACTAATAACTTACAAAACTTGATTGGAGAAGGTGGATTTGGAAAAGTTTACTTAGGCATCCTTAAGAATTGCGCTCAAGTTGCAGTGAAGTTACTTTCTGAATCATCAATGCAAGGTCATAGAGAATTTCGATCAGAGGTGGAACTTTTGATGATTGTTCATCATAGACACTTAGTTTCTCTGATTGGATATTGCGAAGAAAGAGACGTCAGGGCATTAATATATGAATATATGGCTAATGGGAACCTCCATCACCATTTGTCAAGTAATAAAGGAGGTGAATTGAAATGGAAAGATAGGCTTCAAATTGCATTGGACGCAGCTAATGGATTGGATTATTTACACAATGGTTGTAAGCCTGCCATTGTGCATAGAGACCTTAAGGCATCCAATATTTTGCTGGACAAGAATATGGAAGCTAAGATTGCTGACTTTGGATTGTCAAGAGCTTTTGCAAATGACATTGATAGTCATGTCTCAACTCGTCCTGCAGGAACATTTGGTTATCTTGATCCTGAATTTCAAAATTCTGGAAACCTTACAAAAGGGAGTGATGTTTATAGTTTTGGAATAATTCTGCTAGAACTAGTGACTGGAAAACCAGCAGCAAAAAGGCAACCAAATAATTCTTTCATTCTCCTACTTGAATGGGTCATCCCTAAACTTGGAAACAAGGATGTCCAGTCCATTGTTGATCCAAGGTTAAAAGGACAATACAGTGTTGATTCTGCTAGGAAAATTCTTGAGATAGCCATGTCATGCACCGCAACACTTGCAATTCAGAGGCCTGATATAAGTCAAGTGGTAGTTGAACTAAGGGAATGTTTGGCAATGGAGATAAGAATGGACGGGACCAGTCACAACACCAATTCTAGCAGTTCTTTGGATATGAGTACTTCGCAATTTGATTCGAGCTTTACTGCTCCGTCTGCTAGATAG 1023 0.3861 MRKLKVSTKQQSSEQRNRAFSYSDVLEITNNLQNLIGEGGFGKVYLGILKNCAQVAVKLLSESSMQGHREFRSEVELLMIVHHRHLVSLIGYCEERDVRALIYEYMANGNLHHHLSSNKGGELKWKDRLQIALDAANGLDYLHNGCKPAIVHRDLKASNILLDKNMEAKIADFGLSRAFANDIDSHVSTRPAGTFGYLDPEFQNSGNLTKGSDVYSFGIILLELVTGKPAAKRQPNNSFILLLEWVIPKLGNKDVQSIVDPRLKGQYSVDSARKILEIAMSCTATLAIQRPDISQVVVELRECLAMEIRMDGTSHNTNSSSSLDMSTSQFDSSFTAPSAR 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0738 340 Gene3D Phosphorylase Kinase; domain 1 11 105 - -
Lele44g0738 340 PANTHER OS07G0107800 PROTEIN-RELATED 15 310 - -
Lele44g0738 340 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Lele44g0738 340 SMART serkin_6 30 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0738 340 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 106 312 - -
Lele44g0738 340 Gene3D Transferase(Phosphotransferase) domain 1 106 324 - -
Lele44g0738 340 PIRSF TyrPK_CSF1-R 111 229 - -
Lele44g0738 340 PIRSF TyrPK_CSF1-R 268 337 - -
Lele44g0738 340 PIRSF TyrPK_CSF1-R 29 120 - -
Lele44g0738 340 CDD STKc_IRAK 36 300 - -
Lele44g0738 340 Pfam Protein tyrosine and serine/threonine kinase 32 300 IPR001245 GO:0004672|GO:0006468
Lele44g0738 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Lele44g0738 340 MobiDBLite consensus disorder prediction 314 340 - -
Lele44g0738 340 ProSiteProfiles Protein kinase domain profile. 30 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0738 340 SUPERFAMILY Protein kinase-like (PK-like) 14 300 IPR011009 -
Lele44g0738 340 FunFam Leucine-rich repeat receptor-like protein kinase 8 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0738 Lele-ChrLele44 6421037 6424065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0738 20 326 Receptor kinase-like Gene Family AT2G28970 53.376 1.99e-110 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele44g0738 PK_Tyr_Ser-Thr 1e-52 CL0016