Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0722 ATGGCCCTTATGGTCGGCGATAAACAATCTAATACCTTGAAGCACTTCTGCAAAATCTGCAAGAAAGGGTTCGGGTGTGGGAGAGCTTTAGGAGGCCACATGAGGGCGCATGGCCTTGGAGACGACGGTGGCGGGATGGATGATGATGACGACGCGGCCAGCGACTGGGATGGTGGTGGGGATGCTAATGTTCCTCCGTCCATAAAAAAAAATTATGCGTTGAGGACGAACTCCAATCGGTTTAAGAATTCTATTAGGACTTGTGAGAATTGTGGCACAGTGTTCTGGTCTTGGAAGTCCTTCCTTGAACATGGTAATGGTAAGTGCAGTTCCGATGACACCGCTGATGACTCGTTTGTCTCATCGGACGGCGACGATATGTCGGGTGGTGGTGGTCGGAGAAGTTGTAGTAATTCGTCTAAGAGGAAGAGGTCTGTTGGAACCAAAGTGGGAAGCTTCAATTATAATAACCCTAATTGCTCAGCATCCAATGAAGACGAAGACCTCGCTAACTGTTTGATGATGCTGTCGAGCGCCACCGTGGAGACCGATGAATCTTCTGCATTGGCGATGAGCAAAGACGAAGAGAGAAGAAGAAACCCTAGTTTGAGCTTCATGGTTCCAACGTCACAAGTCCCTTCATCAGATCATCATAACAAAGCCAAAGAGGTAGGCGGCAACAATAATCATAATAAGGGTTTGTTTGAATGCAAAGCATGCAAAAAAGTGTTCAATTCGCATCAAGCATTGGGCGGTCACAGAGCCAGCCACAAGAAAGTCAAAGGATGCTTCGCCGCTAGGCTCGACAACCTCGACGACACCGGCGCCGATGATGACGTAATCACCTATGAAGATCAACTCTTCCCAACGAACAAATCCAACAACCTTCACTTCGATCATGGCTCCAACAACAACAATGCCTCATCATCATCCTCTAAAAGGAAATCAAAAGTCCACGAATGCTCGATATGCCACCGAGTTTTCTCGTCCGGACAAGCTCTGGGAGGACACAAGAGGTGTCATTGGATTACATCGAACGCACCAGACACTTCGGCGTTGGCTAGGTTTCAGCAATTTCAAGAACAAATAGAACAACACATTAAAAATAACGCAGTTGTTATACCTAATAAGTTCGACTCTGACCCGATTGATCTGAAGCTCGATCTCAACCTCCCGGATCCACAGCCGGATTCCAGCCGCCGCACCGTAATCTACTTACCGTCATGGGTAGGTGGTGGTGGAGAAAGAGTAGTAAAGGAACATAAAGAAGACAATATTAGTCAAAGCCATCAAATGGACAACGAGAACAAGGGCGAAGAATGCAAGAACAATAGCAGCAAAAAAAACCTTAACATTAGCAATGGTTCGACGATGCAAAATGTGATCGTGGTGGAAGATGACGAAGCTGACAGTAAGGTGAAGTTAGCGAAACTAAGTGAACTAAAAGACATGACAGAAGAAGGCAGTTCTTCGGCATGGTTACAGGTGGGAATCGGTTCTTCGACAACCACTGACGTGGGAACTGACCCATAA 1533 0.4671 MALMVGDKQSNTLKHFCKICKKGFGCGRALGGHMRAHGLGDDGGGMDDDDDAASDWDGGGDANVPPSIKKNYALRTNSNRFKNSIRTCENCGTVFWSWKSFLEHGNGKCSSDDTADDSFVSSDGDDMSGGGGRRSCSNSSKRKRSVGTKVGSFNYNNPNCSASNEDEDLANCLMMLSSATVETDESSALAMSKDEERRRNPSLSFMVPTSQVPSSDHHNKAKEVGGNNNHNKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNLDDTGADDDVITYEDQLFPTNKSNNLHFDHGSNNNNASSSSSKRKSKVHECSICHRVFSSGQALGGHKRCHWITSNAPDTSALARFQQFQEQIEQHIKNNAVVIPNKFDSDPIDLKLDLNLPDPQPDSSRRTVIYLPSWVGGGGERVVKEHKEDNISQSHQMDNENKGEECKNNSSKKNLNISNGSTMQNVIVVEDDEADSKVKLAKLSELKDMTEEGSSSAWLQVGIGSSTTTDVGTDP 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0722 510 Pfam C2H2-type zinc finger 235 259 - -
Lele44g0722 510 Pfam C2H2-type zinc finger 318 343 - -
Lele44g0722 510 Pfam C2H2-type zinc finger 15 37 - -
Lele44g0722 510 ProSitePatterns Zinc finger C2H2 type domain signature. 17 37 IPR013087 -
Lele44g0722 510 MobiDBLite consensus disorder prediction 485 510 - -
Lele44g0722 510 MobiDBLite consensus disorder prediction 424 444 - -
Lele44g0722 510 SUPERFAMILY beta-beta-alpha zinc fingers 234 341 IPR036236 -
Lele44g0722 510 MobiDBLite consensus disorder prediction 132 150 - -
Lele44g0722 510 MobiDBLite consensus disorder prediction 424 453 - -
Lele44g0722 510 ProSiteProfiles Zinc finger C2H2 type domain profile. 235 262 IPR013087 -
Lele44g0722 510 ProSitePatterns Zinc finger C2H2 type domain signature. 321 341 IPR013087 -
Lele44g0722 510 ProSiteProfiles Zinc finger C2H2 type domain profile. 319 341 IPR013087 -
Lele44g0722 510 MobiDBLite consensus disorder prediction 205 227 - -
Lele44g0722 510 MobiDBLite consensus disorder prediction 41 64 - -
Lele44g0722 510 SMART c2h2final6 319 341 IPR013087 -
Lele44g0722 510 SMART c2h2final6 235 257 IPR013087 -
Lele44g0722 510 SMART c2h2final6 15 37 IPR013087 -
Lele44g0722 510 Gene3D Classic Zinc Finger 232 341 - -
Lele44g0722 510 MobiDBLite consensus disorder prediction 293 312 - -
Lele44g0722 510 ProSitePatterns Zinc finger C2H2 type domain signature. 237 257 IPR013087 -
Lele44g0722 510 MobiDBLite consensus disorder prediction 120 150 - -
Lele44g0722 510 MobiDBLite consensus disorder prediction 293 314 - -
Lele44g0722 510 MobiDBLite consensus disorder prediction 484 510 - -
Lele44g0722 510 PANTHER OS02G0659100 PROTEIN 8 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0722 Lele-ChrLele44 6116959 6118491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0722 141 387 C2H2 Transcription Factor Family AT1G02040 35.887 2.17e-33 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele44g0722 zf-C2H2_6 1.3e-12 CL0361