Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0708 ATGGCCGCCGCCGCCGCCGCCCTCCTCCTCCTCCTCCTCCTCTCAGCTTCCTCCATCTTCTGTCGCCGTGAAATGGAGCTGCTTCAGATGGCTCACACCAAAGTCCTTGAAGCTAGGACTTGGGTTGAGAGTCATCAGAAGAATAGTGGCGTTGCTAGCTCAATGCTTTCCTCGTCGTCACTGTTATCATTGGCTGAGGTGTGGGTGGCGCTCGGAGACTGTGATAAGCTGTATGAAGAGAGTGAGCAGAGGCTGAATCAATTGGTATCAAAGCCCGGTTATGATGATAGGGATGAAGAAGATGAGGTAACGTGGGTGAGTGGTGTAATGAGTAACCATAGGACGTGTTTGGATGGGTTGGAAGAGAAAGGCTACGCGGAAGCTCAGGGATTGCATAAGAACTTGACTTCATTACTTGGAGATGCCCTTCACTTATATGCTAACAAGAAGCACAGAGCAAAACCAAAAGCAAAAGCTAGAACATTTTTCACAAGATTTTCTATTTGGTGTGTGCAAAAAGGAACACCCCGAAAGGGAAACATATCCAAATCATACAGTGGACAATTGGCGTCATGGAACCCGAGAGAGTCAAAGGCACATTTCACGGTGGCTCAAGATGGTTCCGGCAGCCACAGAACCATCGGAGCCGCCATAGAAGCAGTGAGTTCAATGGGTCACAATCGTCCCGAAAGAGTCATCATCCATGTCAGATCAGGAGTATACAACGAGAAGGTCGAGATCGGATACGAGCTCAAGAACATGATGCTCGTCGGAGACGGCATCGACAAAACCATTATCACCGGCGCCAGAAGTGTCAGCCGTGGTTCCTCCATCGTCAGCTCCGCCACATTCGATGTATCCGGCGATGGATTCTGGGGAAGGGACATGACGATCGAGAACAGAGCAGGTCCACAGGATCACCAAGCGGTGGCGATGAAGGTGAGCTCAGACCTCTCCGTCTTCTACAGATGCAGCTTCAGAGGCTACCAAGACACACTCTACGTCCACTCCAATCGCCAGTTCTACAGAGACTCCATAATTTCCGGCACCGTGGACTTCATATTCGGCGACGCCTCCGCCGTCTTCCAGAACTGTGACATCCTCCTCCTGAAGCCAATGTCTCACCAATCCACCTTCATCACCGCACAGGGACGCTCCGACCCGAACCAACCCACAGGAATAGTGATCCAAAACTGTAAAATTAGGCCGGCATCCGGCTTCGCAGGAACAAAAAACTACTTGGGAAGGCCATGGAAGAAGTACTCGAGGACGGTGTTCATGAAGAATGATCTTGATGGCTGTATTGATCCAAAAGGGTGGAGTGAGTGGAGTGGTGGTTTTGCATTATCGACTCTATATTATGCAGAGTATATGAACAATGGTGCTGGTTCTTCTACTCAAAATAGAGTGAAATGGCCTGGATTTCATGTTTTGCGTTCTACTTCTGAAGTTAGACCTTTCTCTGTCGACGAGTTTCTGAGCGGAGGTCGGTGGATTCCTGCCACCGGTGTGCCCTTCTCCGCCGGTGTTTGA 1533 0.5016 MAAAAAALLLLLLLSASSIFCRREMELLQMAHTKVLEARTWVESHQKNSGVASSMLSSSSLLSLAEVWVALGDCDKLYEESEQRLNQLVSKPGYDDRDEEDEVTWVSGVMSNHRTCLDGLEEKGYAEAQGLHKNLTSLLGDALHLYANKKHRAKPKAKARTFFTRFSIWCVQKGTPRKGNISKSYSGQLASWNPRESKAHFTVAQDGSGSHRTIGAAIEAVSSMGHNRPERVIIHVRSGVYNEKVEIGYELKNMMLVGDGIDKTIITGARSVSRGSSIVSSATFDVSGDGFWGRDMTIENRAGPQDHQAVAMKVSSDLSVFYRCSFRGYQDTLYVHSNRQFYRDSIISGTVDFIFGDASAVFQNCDILLLKPMSHQSTFITAQGRSDPNQPTGIVIQNCKIRPASGFAGTKNYLGRPWKKYSRTVFMKNDLDGCIDPKGWSEWSGGFALSTLYYAEYMNNGAGSSTQNRVKWPGFHVLRSTSEVRPFSVDEFLSGGRWIPATGVPFSAGV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0708 510 PANTHER PECTINESTERASE 35 500 - -
Lele44g0708 510 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 148 IPR035513 -
Lele44g0708 510 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 127 IPR035513 -
Lele44g0708 510 CDD PMEI-like_4 69 147 - -
Lele44g0708 510 FunFam Pectinesterase 194 510 - -
Lele44g0708 510 Pfam Plant invertase/pectin methylesterase inhibitor 47 137 IPR006501 GO:0004857
Lele44g0708 510 Gene3D - 195 510 IPR012334 -
Lele44g0708 510 ProSitePatterns Pectinesterase signature 2. 347 356 IPR033131 -
Lele44g0708 510 Pfam Pectinesterase 201 495 IPR000070 GO:0030599|GO:0042545
Lele44g0708 510 SUPERFAMILY Pectin lyase-like 197 509 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0708 Lele-ChrLele44 5989158 5993381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0708 8 510 Carbohydrate Esterase AT3G60730 50.672 0.0 519