Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0690 ATGGATTGTGGGTGTAGTGAGAATAATAACAATGGTTATGGTGGTGGTGGGGATGGTGATCGTGGTGGTCAGAGAGGGCCTTGTGGGGCGTGCAAATTCCTGAGAAGAAAGTGCGTGAAGGGTTGTGTATTTGCACCCTACTTCGACTCCGATCAAGGCACGGCACACTTCGCGGCGGTGCACAAGGTGTTTGGAGCCAGCAACGCCGCCAAGCTTCTGCTGAGAATCCCTCCTCACCACCGTCTCGACGCCGTCCTCACTCTCTCCTACGAGGCTCTCTCGAGGGCTCGAGATCCCGTCTATGGCTGCGTCGCCCACATCTTCGCCCTGCAACAACAGGTGATGAACATGCAGGCAGAGTTAGCTTATGTGCAAGCTCGTCTTTCGACGTTGCAGCGTCTCCCGGCGGCGGTGGCCGTTGCAACTCTTCCTCAATCAGAAACCTCTTCATCTTCAAACAATGACTTTCCCTTTGATCCAACTAGTGTACTTCATCAATTGACAACTTTTCCCAACCCTTGCGATCTTCAACATGATGGGGATCTTCAAGCTTTAGCCAGAGATTTTGTATCAAGAGTGAAAGAGGAGAAGAAAATGATCTAA 603 0.5141 MDCGCSENNNNGYGGGGDGDRGGQRGPCGACKFLRRKCVKGCVFAPYFDSDQGTAHFAAVHKVFGASNAAKLLLRIPPHHRLDAVLTLSYEALSRARDPVYGCVAHIFALQQQVMNMQAELAYVQARLSTLQRLPAAVAVATLPQSETSSSSNNDFPFDPTSVLHQLTTFPNPCDLQHDGDLQALARDFVSRVKEEKKMI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0690 200 PANTHER LOB DOMAIN CONTAINING PROTEIN 24 146 - -
Lele44g0690 200 Pfam Lateral organ boundaries (LOB) domain 27 125 IPR004883 -
Lele44g0690 200 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0690 Lele-ChrLele44 5798158 5803380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0690 19 192 AS2 family AT4G00210 53.623 2.06e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele44g0690 LOB 4.5e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0657 41 16493200 16498148 Lele44g0690 44 5798158 5803380 hybridization
Lele42g0651 42 19484566 19490818 Lele44g0690 44 5798158 5803380 hybridization