Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0685 ATGGATCCAGTCGCTGCACAAGGTCGTCCTCTTCCACCACCTTTTCTCACCAGAGATCTTCATCTTCATCCCCATCATCAATTTCAGAGCCACCATAATAACAATCACTCCGTCGCCGCCGACGATGAGCAGGCTGGTAATGGCAGCTTGAACCGCGGGCAGAAGCGAGATCACGAGAATACCGTCTCTGAGGGGAAGGAATTGGGTTCTAACACAGGTTTTTCCGGAGACGCTGTTGGAGGTAGCGGTGGGGAAAATAGTGCTAGAAGGCCTCGTGGAAGACCCGCCGGTTCGAAGAACAAGCCTAAGCCTCCAATCATCATAACGAGGGATAGCGCCAACGCGCTTAGGTCCCACGTCATGGAGATCGCAAATGGCGGAGACATCATGGAGAGTGTCGCCACCTTCGCGCGGCGGAGGCAGCGTGGGGTTTGCATTCTCAGTGGGAGTGGCACCGTCACGAATGTCACCCTTCGGCAGCCCGCTTCACCCGGTGCAGTTGTCACCTTACATGGGAGATTCGAGATTCTATCACTGTCCGGCTCCTTCCTGCCTCCGCCGGCACCACCTGCAGCATCAGGGCTAGCCATATATCTCTCCGGCGGACAGGGTCAAGTCGTTGGAGGCACCGTGGTGGGGCCGTTGTTGGCGTCAGGTCCAGTGGTCATTATGGCTGCTTCGTTCGGAAATGCGGCGTACGAGAGGCTGCCGTTAGAGGAGGAGGAGACTCCAGTGCCGGTGACCGGAAGCGGAGGGTTAGGCTCGCCGGGAGAAATCGTGGGACAACAGCAACAAATCGTCGGAGATCCTAACACACCACCATCAATGTTTCATGGAGTTCCTCAGAATCTTCTGAATTCTTGCCAATTACCAGCTGAAGGATTTTGGGGTGGAGGCAGTGCTGTTCGTCCTCCATTCTAA 921 0.5581 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQSHHNNNHSVAADDEQAGNGSLNRGQKRDHENTVSEGKELGSNTGFSGDAVGGSGGENSARRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGGDIMESVATFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLSGGQGQVVGGTVVGPLLASGPVVIMAASFGNAAYERLPLEEEETPVPVTGSGGLGSPGEIVGQQQQIVGDPNTPPSMFHGVPQNLLNSCQLPAEGFWGGGSAVRPPF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0685 306 PIRSF ESCAROLA 16 306 IPR014476 GO:0003680
Lele44g0685 306 MobiDBLite consensus disorder prediction 25 107 - -
Lele44g0685 306 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 47 284 IPR014476 GO:0003680
Lele44g0685 306 FunFam AT-hook motif nuclear-localized protein 116 243 - -
Lele44g0685 306 CDD DUF296 117 184 IPR005175 -
Lele44g0685 306 MobiDBLite consensus disorder prediction 31 51 - -
Lele44g0685 306 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 229 IPR005175 -
Lele44g0685 306 Gene3D - 116 245 - -
Lele44g0685 306 ProSiteProfiles PPC domain profile profile. 113 251 IPR005175 -
Lele44g0685 306 SUPERFAMILY AF0104/ALDC/Ptd012-like 113 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0685 Lele-ChrLele44 5725047 5725967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0685 1 297 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 60.252 5.60e-84 254