Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0662 ATGGGGCCCTTTCTCGATCGCCTGTGCCAGAGTGCTGCATGTGGTGGAATTATCAAAGACAAGAATGTTATGAATACATATGATAAAACATTGGCATGGATAGATACCAAACGCACCGTTTCGGCTCGGCTTCAATGCTGTTATGCTACATTTGAACTTCTCACTAGCTCTTTTACCCAATTCGATAGAAACTCTAGGGTTTTGATCATTTTTTTTAGAGGTGCACTACCTCTGATCTTCAAATTCAATCTCAGGTTCCTTTCTCTGTCCTTGTTCATCGCTGTCTTCCGATCCAGTCTCTGCCTGAAAATGCCGGCTGTTTACGGCGCTCGCCTGACTACCTTCGAAGACTCCGAGAAGGAGAGTGAATATGGTTACGTTCGCAAGGTCTCAGGACCAGTCGTGGTTGCAGATGGCATGGCTGGAGCTGCTATGTATGAACTAGTGCGTGTTGGTCGTGACAACCTCATTGGTGAAATTATTCGTTTGGAAGGGGATTCTGCTACTATCCAAGTTTATGAGGAAACAGCCGGTTTAATGGTCAACGATCCTGTCTTACGAACACACAAGCCTTTATCAGTGGAGTTGGGGCCTGGAATATTGGGAAATATTTTTGATGGAATTCAGAGGCCATTGAAAACTATTGCTAAACGATCTGGTGATGTCTACATTCCTCGTGGTGTCTCTGTTCCAGCTCTTGATAAAGATACGCTCTGGGAGTTTCAGCCTAAAAAAATTGGTGAAGGAGACCTATTAACTGGGGGAGATCTCTATGCTACTGTTTTTGAGAACAGTCTAATGCAGCATCATATTGCACTTCCTCCTGATGCCATGGGAAAAATTACTTACATTGCACCACCTGGACAATATTCCTTGAAGGATACTGTATTGGAGCTTGAGTTTCAAGGTGTTAAAAAACAGTTCACCATGCTCCAGACTTGGCCTGTTCGTACACCAAGGCCCGTTGCATCAAAGCTTGCAGCTGATACTCCTCTGCTTACTGGTCAGCGTGTTCTTGATGCCCTCTTCCCCTCTGTTCTTGGTGGGACTTGTGCTATTCCTGGGGCTTTTGGTTGTGGCAAAACAGTCATCAGTCAGGCTCTTTCTAAGTATTCCAACTCTGATTCTGTGGTCTATGTTGGTTGTGGGGAACGTGGAAATGAAATGGCTGAAGTTCTTATGGACTTTCCCCAACTTACAATGACATTGCCTGATGGTCGTGAAGAATCTGTCATGAAGCGTACAACTCTGGTGGCTAACACTTCGAACATGCCTGTGGCTGCTCGTGAAGCTTCAATTTATACAGGAATCACTCTAGCTGAGTATTTTAGAGATATGGGTTACAATGTCAGCATGATGGCAGATTCAACTTCTAGATGGGCAGAAGCATTGCGTGAAATTTCTGGACGACTGGCAGAAATGCCTGCTGATAGTGGGTATCCTGCTTACCTTGCTGCACGTTTAGCTTCTTTCTATGAACGTGCTGGCAAAGTAAAATGCCTTGGAGGTCCTGAACGCACCGGTAGTGTCACAATTGTTGGTGCTGTTTCTCCACCCGGAGGAGATTTCTCAGATCCTGTGACATCTGCAACCCTCAGTATAGTTCAGGTTTTCTGGGGTTTGGACAAAAAGCTTGCCCAGAGGAAGCATTTTCCTTCTGTCAACTGGCTTATTTCCTATTCAAAGTATTCTGGGGCATTAGAATCATTCTATGAGCAATTTGATCCAGATTTTATTAACATTAGGACAAAGGCTCGTGAAGTTTTACAGAGAGAAGATGACCTCAATGAAATTGTCCAGCTTGTAGGAAAGGATGCTTTGGCTGAAGGAGATAAGATCACCTTGGAAACTGCAAAGCTTTTGAGAGAGGATTATCTTGCTCAGAATGCTTTTACTCCATATGACAAATTCTGTCCCTTCTACAAGTCCGTTTGGATGATGCGGAACATCATCCATTTCTACAATTTGGCAAATCAGGCAGTAGAGCGGGGAGCTGGCACAGATGGTCAAAAGATAACTTACACCCTCATCAAGCATCGCTTGGGAGATCTCTTCTACCGTTTAGTGTCTCAGAAATTTGAGGATCCAGCGGAAGGTGAAGCAGCTCTGGTTGAGAAATTTAAGAAATTACACGAGGACCTAACTAATGGTTTCCGCAACCTTGAGGACGAAACCCGGTGA 2181 0.4448 MGPFLDRLCQSAACGGIIKDKNVMNTYDKTLAWIDTKRTVSARLQCCYATFELLTSSFTQFDRNSRVLIIFFRGALPLIFKFNLRFLSLSLFIAVFRSSLCLKMPAVYGARLTTFEDSEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGRDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDTLWEFQPKKIGEGDLLTGGDLYATVFENSLMQHHIALPPDAMGKITYIAPPGQYSLKDTVLELEFQGVKKQFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDSVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSGALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGTDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEAALVEKFKKLHEDLTNGFRNLEDETR 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0662 726 CDD V_A-ATPase_A 191 563 - -
Lele44g0662 726 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 574 656 - -
Lele44g0662 726 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 112 724 IPR022878 GO:0046034|GO:0046961
Lele44g0662 726 Pfam ATPsynthase alpha/beta subunit N-term extension 205 326 IPR031686 -
Lele44g0662 726 CDD ATP-synt_V_A-type_alpha_N 124 190 - -
Lele44g0662 726 FunFam V-type proton ATPase catalytic subunit A 123 192 - -
Lele44g0662 726 FunFam V-type proton ATPase catalytic subunit A 237 308 - -
Lele44g0662 726 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 120 192 IPR036121 GO:0046034|GO:1902600
Lele44g0662 726 TIGRFAM V-ATPase_V1_A: V-type ATPase, A subunit 123 714 IPR005725 GO:0033180|GO:0046961|GO:1902600
Lele44g0662 726 Gene3D - 563 725 IPR024034 -
Lele44g0662 726 ProSitePatterns ATP synthase alpha and beta subunits signature. 552 561 IPR020003 GO:0005524
Lele44g0662 726 Coils Coil 704 724 - -
Lele44g0662 726 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 335 561 IPR000194 GO:0005524
Lele44g0662 726 CDD ATP-synt_V_A-type_alpha_C 578 684 - -
Lele44g0662 726 Pfam ATP synthase alpha/beta family, beta-barrel domain 128 188 IPR004100 GO:0046034|GO:1902600
Lele44g0662 726 FunFam V-type proton ATPase catalytic subunit A 562 715 - -
Lele44g0662 726 Gene3D - 237 308 - -
Lele44g0662 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 305 566 IPR027417 -
Lele44g0662 726 FunFam V-type proton ATPase catalytic subunit A 297 560 - -
Lele44g0662 726 Hamap V-type ATP synthase alpha chain [atpA]. 122 725 IPR022878 GO:0046034|GO:0046961
Lele44g0662 726 Gene3D - 194 560 IPR027417 -
Lele44g0662 726 Gene3D - 123 192 IPR023366 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0662 Lele-ChrLele44 5396089 5403320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0662 104 726 Primary Pumps ATPases(2) AT1G78900 93.900 0.0 1212