Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0652 ATGGAGCCAACTATCTCTCGTAGCGCTAATTCCTCCACCAATGGCCTCCTCTCCGTCAACATCCCCAGCCACAGCGATGTCGAGTCCCTCCCTCCTCGGATCAATGACGACGACGACGACGAAGTTATCGATCCTGATGATCCTTTCGACGTCACTCACACCAAGAATGCGCCAGCTGAGACACTCCAGCGATGGAGAGAAGCGACTCTAGTTCTCAATGCTTCCCGGCGATTTAGATATACTCTGGACTTGAAAAAGGGAGATGAGGAAGAGCAAAAGAAAGGGTTGATAAGGGCCCATGCCCAAGTCGTACGAGCAGCGCTGCTTTTCAGATTAGCTGGTGAACGTGATCTAGCGGTAGGCACAGGAGTGTCAGCCCAAACCTCAGGTGATAACTTCGGAGTTGGGCTCGAACAACTTGTTTCAATGTCCAAGGATCAGAACATTTCAGCTTTGCAAGAATGCGGAGGGGTCAAAGGCTTATCAGATTTATTAAAATCAGATCTTGAGAAAGGAATCAATGGAGATGACGATGATATGTTAAAAAGGAGAGTGACATTTGGAACGAATACATACCCCAAGAAAAAGGGGCGGAGTTTCTGGAATTTTCTATGGGATGCTTGGCAAGATCTGACCCTTATCATATTGATTATAGCAGCCGTGGTATCATTGGCACTTGGAATAAAAACAGAGGGCTTGGAAGAAGGATGGTATGATGGAGGAAGCATTGCCTTTGCTGTTTTTCTTGTCATCATAGTAACAGCTACCAGTGATTATCGCCAATCTCTGCAGTTTCAGAATTTGAATTCAGAAAAAGAAAATATACAATTGGAGGTCATTAGAGGCAGTAGAGCAACAAAGATATCAATATTTGATATTGTTGTTGGTGATCTTGTACCTCTTAAAATAGGAGACCAGGTTCCTGCTGATGGAGTTATAGTCACTGCTCACTCACTTGCCATTGATGAATCCAGCATGACTGGTGAAAGCAAGATTATTCACAAAGACCACAAATCCCCTTTTTTGATGTCTGGCTGCAAAGTAGCAGATGGTGTTGGAGTTATGCTGGTAACTGGGGTTGGTATCAATACGGAGTGGGGATTGTTGATGGCAAGCATCTCTGAAGATACTGGAGAAGAGACTCCATTGCAGGTTCCACCTGATCCATCCAAAACAAAGAAAGAAAAGGCTGTTGTACGTTTGAATGGAGTTGCAACTTTTATCGGCATGATAGGTCTTACAGTAGCTGTTGTTGTGCTAGTGGTCCTATTGGCCAGATACTTTACTGGAAACACGAAAGATGTAGATGGAAATGTCCAATTTGTTGCTGGCCAAACGAGTATCAGTAATGCAATAGATGGGGTTGTCAAAGTTTTTACTATTGCTGTCACCATTGTGGTTGTTGCAGTTCCTGAAGGTCTTCCTCTGGCTGTTACCTTAACCCTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTGAGAAGGCTTTCGGCCTGTGAAACTATGGGCTGTGCAACAACAATTTGCAGTGATAAAACAGGAACGTTAACCTTGAATCAGATGACTGTGGTTGAGGCATGCGTTGGGAGGAAGAAACTGAATTCTGCTGGTGACTCATCAAAGTTTAATTCAGAAGTTTTATCTCTGATTAAAGAGGGCATTGCACAGAATACAACTGGAACTGTTTTTGTGCCTAAGGATGGTGGAGAGACTGAGGTTTCAGGGTCCCCTACAGAAAAGGCAATCCTTTCTTGGGCAGTCAAGTTGGGAATGGATTTTGATCTTATAAGATCAAATTCAACACTTCTCCATGTATTTCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTCTTGCTGAAGCAAAATGTGGACTCCACAGTGCATATACATTGGAAAGGCGCTGCAGAGATAGTACTAGGAAAATGCACTCAATATCTTGATTCAAATGGTAGCTTGCTTTCTATTGAAGAAGAGAAGGACTTTTTCAAGGAAGCTATTGAAGACATGGCTGCTCGTAGTTTACGGTGTGTTGCCATTGCATACAGGTCATATGAATTGGACAAAGTTCCCTCTATTGAGGAGGATTTGGCCCAGTGGTCCTTACCTGAGGATGAGCTTGTTTTGCTTGCTATAGTTGGTATAAAGGATCCCTGTCGCCCTGGTGTCAAAGATGCGGTGACAGTATGCACTGCAGCTGGTGTTAAGGTGCGCATGGTTACGGGAGACAATCTTCAAACGGCAAAGGCAATAGCTTTGGAGTGTGGGATACTGGCTTCACATTTAGATGCTGTCGAACCAGTTATCATTGAAGGAAAGACATTCCGGGCGTTATCTGAACAAGAAAGGGAACAAGTTGCTAAACAAATAACAGTGATGGGGAGGTCTTCTCCAAATGACAAGCTTTTACTTGTTCAAGCACTGCGTAAAGGAGGTGAAGTTGTTGCTGTTACTGGAGATGGCACCAATGATGCTCCCGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATTTCTGGAACTGAAGTCGCAAAAGAAAGTTCAGATATTATAATCCTGGATGATAACTTTGCTTCAGTTGTAAAGGTAGTCCGCTGGGGACGTTCTGTATCTGCAAATATTCAGAAATTTATACAGTTCCAGCTCACAGTTAATGTAGCAGCTCTTGCGATAAATGTTGTGGCGGCAGTTTCTTCGGGTGATGTTCCTTTAAATGCAGTGCAGCTTTTGTGGCTTAACCTTATCATGGACACACTTGGGGCCCTAGCACTAGCTACGGAACCGCCTACTGACCACCTTATGCACAGACCACCAGTTGGTCGAAGGGAACCTCTCATAACGAATAACATGTGGAGGAACTTGCTTGTCCAGGCTGTATATCAAATTGCAGTTCTCCTTGTTCTTAATTTTGGTGGAGAAAGTATTCTCCATGGTGACTCTGAAGCCGAAACCTTGCAACTGAAGAATACTTTGATTTTCAATGCATTTGTCCTCTGCCAAATTTTCAATGAGTTCAATGCTCGAAAACCAGATCAAATGAACGTATTCATCGGAGTGACTAAGAACCGTCTCTTTGTGGGCATTGTGGGAATGACCGTTATACTTCAGGTAATCATTATCGAGTTTCTTGGAAAGTTCACTAGCACGGTGAGGCTGGATTGGCAGATGTGGGTCGTTTCTATTATCATGGGTCTCGTCAGTTGGCCTCTTGCTGTGCTTGGAAAGTTCATTCCAGTTCCAAAAACACCATTATCTCGCACCTTCAAGAGGATGCTTATGCGATTCAAGAGATCAAAAACTCCTGCTCCTAATTAA 3324 0.4386 MEPTISRSANSSTNGLLSVNIPSHSDVESLPPRINDDDDDEVIDPDDPFDVTHTKNAPAETLQRWREATLVLNASRRFRYTLDLKKGDEEEQKKGLIRAHAQVVRAALLFRLAGERDLAVGTGVSAQTSGDNFGVGLEQLVSMSKDQNISALQECGGVKGLSDLLKSDLEKGINGDDDDMLKRRVTFGTNTYPKKKGRSFWNFLWDAWQDLTLIILIIAAVVSLALGIKTEGLEEGWYDGGSIAFAVFLVIIVTATSDYRQSLQFQNLNSEKENIQLEVIRGSRATKISIFDIVVGDLVPLKIGDQVPADGVIVTAHSLAIDESSMTGESKIIHKDHKSPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVPPDPSKTKKEKAVVRLNGVATFIGMIGLTVAVVVLVVLLARYFTGNTKDVDGNVQFVAGQTSISNAIDGVVKVFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGCATTICSDKTGTLTLNQMTVVEACVGRKKLNSAGDSSKFNSEVLSLIKEGIAQNTTGTVFVPKDGGETEVSGSPTEKAILSWAVKLGMDFDLIRSNSTLLHVFPFNSEKKRGGVLLKQNVDSTVHIHWKGAAEIVLGKCTQYLDSNGSLLSIEEEKDFFKEAIEDMAARSLRCVAIAYRSYELDKVPSIEEDLAQWSLPEDELVLLAIVGIKDPCRPGVKDAVTVCTAAGVKVRMVTGDNLQTAKAIALECGILASHLDAVEPVIIEGKTFRALSEQEREQVAKQITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVSANIQKFIQFQLTVNVAALAINVVAAVSSGDVPLNAVQLLWLNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNNMWRNLLVQAVYQIAVLLVLNFGGESILHGDSEAETLQLKNTLIFNAFVLCQIFNEFNARKPDQMNVFIGVTKNRLFVGIVGMTVILQVIIIEFLGKFTSTVRLDWQMWVVSIIMGLVSWPLAVLGKFIPVPKTPLSRTFKRMLMRFKRSKTPAPN 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0652 1107 SUPERFAMILY Calcium ATPase, transduction domain A 277 371 IPR008250 -
Lele44g0652 1107 SUPERFAMILY HAD-like 510 925 IPR036412 -
Lele44g0652 1107 Pfam haloacid dehalogenase-like hydrolase 509 834 - -
Lele44g0652 1107 ProSitePatterns E1-E2 ATPases phosphorylation site. 514 520 IPR018303 -
Lele44g0652 1107 FunFam Calcium-transporting ATPase 837 1084 - -
Lele44g0652 1107 Pfam Cation transporter/ATPase, N-terminus 157 223 IPR004014 -
Lele44g0652 1107 Gene3D - 178 374 - -
Lele44g0652 1107 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 519 717 IPR023299 GO:0000166
Lele44g0652 1107 Gene3D - 522 720 IPR023299 GO:0000166
Lele44g0652 1107 Gene3D - 59 111 - -
Lele44g0652 1107 MobiDBLite consensus disorder prediction 1 54 - -
Lele44g0652 1107 MobiDBLite consensus disorder prediction 1 25 - -
Lele44g0652 1107 Pfam E1-E2 ATPase 276 490 - -
Lele44g0652 1107 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 447 538 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g0652 1107 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 786 900 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g0652 1107 Gene3D - 509 865 IPR023214 -
Lele44g0652 1107 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 132 1082 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele44g0652 1107 PRINTS P-type cation-transporting ATPase superfamily signature 844 856 - -
Lele44g0652 1107 PRINTS P-type cation-transporting ATPase superfamily signature 713 724 - -
Lele44g0652 1107 PRINTS P-type cation-transporting ATPase superfamily signature 512 526 - -
Lele44g0652 1107 PRINTS P-type cation-transporting ATPase superfamily signature 735 745 - -
Lele44g0652 1107 PRINTS P-type cation-transporting ATPase superfamily signature 820 839 - -
Lele44g0652 1107 PRINTS P-type cation-transporting ATPase superfamily signature 322 336 - -
Lele44g0652 1107 PANTHER CATION TRANSPORTING ATPASE 125 1082 - -
Lele44g0652 1107 CDD P-type_ATPase_Ca_PMCA-like 182 953 - -
Lele44g0652 1107 Gene3D - 206 1074 - -
Lele44g0652 1107 SUPERFAMILY Calcium ATPase, transmembrane domain M 156 1082 IPR023298 -
Lele44g0652 1107 SFLD Haloacid Dehalogenase 494 872 - -
Lele44g0652 1107 FunFam Calcium-transporting ATPase 9 plasma membrane-type 352 536 - -
Lele44g0652 1107 FunFam Calcium-transporting ATPase 255 374 - -
Lele44g0652 1107 FunFam Calcium-transporting ATPase 713 865 - -
Lele44g0652 1107 FunFam Calcium-transporting ATPase 57 113 - -
Lele44g0652 1107 Pfam Cation transporting ATPase, C-terminus 905 1079 IPR006068 -
Lele44g0652 1107 FunFam Calcium-transporting ATPase 522 720 - -
Lele44g0652 1107 SMART Cation_ATPase_N_a_2 157 228 IPR004014 -
Lele44g0652 1107 SFLD p-type atpase 494 872 IPR044492 -
Lele44g0652 1107 Pfam Ca2+-ATPase N terminal autoinhibitory domain 46 86 IPR024750 GO:0005516
Lele44g0652 1107 FunFam Calcium-transporting ATPase 206 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0652 Lele-ChrLele44 5296115 5311642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0652 9 1102 Primary Pumps ATPases AT3G21180 72.975 0.0 1604