Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0641 ATGAAGGATTCGGAGAAAAGGAAGTACCCCATTGGCCCTGAAAATTATGAACTGCTCGAGGAGATTGGCCAAGGGGTCAGTGCTCATGTGCATCGCGCTTGTTGCCTTACTTTTAATGAGATTGTTGCCATAAAAATCCTGGATTTTGAGCGAGAAAACTGCGATCTGAATAATGTTTTTCGTGAAGCACAGACCATGACCTTGGTGGACCACCCTAACGTCCTCAAATCACACTGCTCCTTTGTTAGCGATCATAATCTATGGGTTGTGATGCCATATATGGCTGGTGGTTCGTGTCTTCACATATTGAAAGCCTCTCACCCAGATGGTTTTGAGGAGGTTGTAATAGCAACAATATTGCGAGAGGTATTGAAGGGTTTAGAGTACCTTCATCATCATGGCCATATACATAGAGATGTTAAAGCCGGGAACATTCTAATTGATGCACGTGGTGCAATAAAGCTGGGGGATTTTGGTGTATCTGCTTGTCTTTTTGATTCAGGTGACAGGCAACGTACAAGGAATACATTTGTGGGGACACCTTGCTGGATGGCACCAGAGGTCATGGAGCAAGTGCATGGTTATGACTTCAAAGCAGATATCTGGTCTTTTGGTATAACAGCATTGGAGCTTGCCCATGGTCACGCTCCTTTCTCAAAGTATCCTCCCATGAAGGTACTTCTTATGACATTGCAAAATGCGCCACCTGGCCTTGATTATGAACGCGATAGGAAGTTCTCTAAGTCATTTAAGGATATGATTGCTCGCTGCTTGGTAAAAGATCCTTCAAAACGACCCACTGCAAGCAAGTTGCTAAAGAATTCCTTCTTTAAGCAAGCTCGCTCAAATGATTATATTTTGCGAACGCTTTTGGAGGGGCTGCCTAATTTAGGTGATCGCATCAAGGCCCTAAAGAGGAAAGAAGAAGATATGCTTGCCAAAGAACAAATGCCTGATGGGCAGAAGGAGGAAATATCACAGAATGAATACAAGCGAGGAATTAGCAGCTGGAACTTCAATCTTGATGATATGAAAGCTCAGGCTTCATTGATACAGGATTCTGATGATGCAATATCTGAAATCAATCCAGGAGGGAGTACGAGTTCTGTATCTACAATTGATGTACAAGAGGAGCAATCACCACGTGCAAACCACTCTCAAATTGCAGATATGGAAGATAACGAAGAGATGAGAAATCAATCAGCTTCCGTGTCAGCAGGAGATTTCACAAAAACTGATTCCAAGGTTAGAAGTGAAAAATCTAATGATGACTCTATCACCAGTTTAAGCCATGAACATCACGAATCACGGGGTGCTTTTCTGTCTCTTGAAGATCATATAGTGGACCATAATTTGAGTGAAAAATGTGATATGGAGAATGGTGGAAGACAGGTGGAGCCTACCCCTTCTTGTCACAGAAGATGCTCATCAAGCATCTTACCTGAAGTTACTCACACACCTACTCGTGGAGAAATAGAGAAGATACCAACTCTGTCCCATAGCATTTCAAATTGCAACGCAACGATGGTACCACAGTCAGGAGAAGCAGCTAATTTGGATGAAACAGATGAGAAAGTAAAGGTACCAGTTGTTCAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGAGTTAGAAAAGGTGGCCCCAACTCCTATTCTGCAAAAGAGTCAAAGCATGCAGGTTATTAGTTCACACAATGTAACTCCTCTACCTGCTTCAATTTTACCACAGTCATCGACATCCCAGGCTACATCATCAAATCTTTCTGGTTCTTCGCTTTACCAATTATTGCATTGTGTGCTGCAAGCAAATATTGAACAAAGGGACGCTATCTTACTTTTAATGAAATATGTAACTGCTGGTGACTCAACAGTTGATGGAGCATCTAACCAAGCATTGGCTTCAGCAATGGAGAAATCTTTGCTTGAAGCATCTCATGAGAGAGAGAAAGAGCTACTTCATGAAATAGTTGACTTGCACAGGAGGCACCAAAGTGACCAGGAAGAGATTAAAAAATTGAAATCAGAAAATGCTCAGCCTCAGGAGGTGATATGA 2061 0.4226 MKDSEKRKYPIGPENYELLEEIGQGVSAHVHRACCLTFNEIVAIKILDFERENCDLNNVFREAQTMTLVDHPNVLKSHCSFVSDHNLWVVMPYMAGGSCLHILKASHPDGFEEVVIATILREVLKGLEYLHHHGHIHRDVKAGNILIDARGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKDMIARCLVKDPSKRPTASKLLKNSFFKQARSNDYILRTLLEGLPNLGDRIKALKRKEEDMLAKEQMPDGQKEEISQNEYKRGISSWNFNLDDMKAQASLIQDSDDAISEINPGGSTSSVSTIDVQEEQSPRANHSQIADMEDNEEMRNQSASVSAGDFTKTDSKVRSEKSNDDSITSLSHEHHESRGAFLSLEDHIVDHNLSEKCDMENGGRQVEPTPSCHRRCSSSILPEVTHTPTRGEIEKIPTLSHSISNCNATMVPQSGEAANLDETDEKVKVPVVQQRGRFKVTSENVELEKVAPTPILQKSQSMQVISSHNVTPLPASILPQSSTSQATSSNLSGSSLYQLLHCVLQANIEQRDAILLLMKYVTAGDSTVDGASNQALASAMEKSLLEASHEREKELLHEIVDLHRRHQSDQEEIKKLKSENAQPQEVI 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0641 686 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0641 686 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Lele44g0641 686 MobiDBLite consensus disorder prediction 666 686 - -
Lele44g0641 686 Gene3D Transferase(Phosphotransferase) domain 1 97 331 - -
Lele44g0641 686 MobiDBLite consensus disorder prediction 357 433 - -
Lele44g0641 686 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0641 686 MobiDBLite consensus disorder prediction 412 433 - -
Lele44g0641 686 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0641 686 Coils Coil 658 678 - -
Lele44g0641 686 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Lele44g0641 686 MobiDBLite consensus disorder prediction 357 387 - -
Lele44g0641 686 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Lele44g0641 686 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Lele44g0641 686 CDD STKc_OSR1_SPAK 14 277 - -
Lele44g0641 686 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Lele44g0641 686 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0641 Lele-ChrLele44 5145342 5152678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0641 5 664 MAP Kinase Kinase Kinase Kinase AT1G79640 60.819 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lele44g0641 Pkinase 6.8e-61 CL0016