Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0640 ATGGAGAAATACGAGAAGTTGGAGAAGGCCGGAGAAGGGACTTATGGGAAGGTATACAAGGCAAAGGAGAAAGCCACCGGGCAGCTGGTGGCTCTGAAGAAGACTCGTCTGGAAATGGACGAGGAGGGAATTCCTCCTACTGCCCTTCGAGAAATCTCCCTCCTTCAGATGCTCTCACAGTCCCTCTACATTGTCCGCCTGCTCTGTGTCGAGCACGTCGACAAGGCTTCAAAGATTGTGCCTGCAGGTAGCCAGCCCAGTACCAAGCCCCTCCTCTACCTCGTCTTTGAGTACCTAGACACTGACCTTAAGAAGTTCATTGATTCTCACCGTAAGGGCCCCAACTCCAGGCCTCTTGCTCCTCCTCTCATTCAGAGCTTCCTTTTCCAGCTTTGCAAGGGAATGTTTAATCTGCCAATATTTCTTAATGGCCAATTTGTTGGTTTATATATCTTTCGCCTAACTGAATTTGGTTTTATAGCTGAAATGGTGAGAAGGCAAGCCCTGTTTCCTGGGGATTCTGAGTTCAAACAGCTCCTTAATATATTCAGTCATTTCATCAAGGTTAGTTCGTACTTTCCTAAATCCTACATTGACTTCATTTTTATTTATGGTCATCGAAGGTTGTTGGGTACTCCAACTGAGGAGCAATGGCCAGGAGTTACTTCTTTCAGGGACTGGCATGCCTACCCCCTGTGGAAACCACAGGACTTGGCATTAGCTGTAACATCTTTGGGACCTGAAGGAGTAGATCTTCTCTCGAAAATGCTCAGGTATAATCCTGCTGAGAGAATCTCTGCAAAGGCAGCACTTGATCATCCCTACTTTGACGGCTTGGACAAGTCTCAATTTTAG 855 0.4678 MEKYEKLEKAGEGTYGKVYKAKEKATGQLVALKKTRLEMDEEGIPPTALREISLLQMLSQSLYIVRLLCVEHVDKASKIVPAGSQPSTKPLLYLVFEYLDTDLKKFIDSHRKGPNSRPLAPPLIQSFLFQLCKGMFNLPIFLNGQFVGLYIFRLTEFGFIAEMVRRQALFPGDSEFKQLLNIFSHFIKVSSYFPKSYIDFIFIYGHRRLLGTPTEEQWPGVTSFRDWHAYPLWKPQDLALAVTSLGPEGVDLLSKMLRYNPAERISAKAALDHPYFDGLDKSQF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0640 284 SMART serkin_6 4 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0640 284 Gene3D Phosphorylase Kinase; domain 1 1 114 - -
Lele44g0640 284 ProSiteProfiles Protein kinase domain profile. 4 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0640 284 PANTHER CELL DIVISION PROTEIN KINASE 1 135 - -
Lele44g0640 284 FunFam Cyclin-dependent kinase B2,2 1 100 - -
Lele44g0640 284 Pfam Protein kinase domain 4 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0640 284 SUPERFAMILY Protein kinase-like (PK-like) 2 280 IPR011009 -
Lele44g0640 284 Gene3D Transferase(Phosphotransferase) domain 1 157 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0640 Lele-ChrLele44 5139349 5140929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0640 1 284 Core Cell Cycle Gene Families AT3G54180 56.467 8.52e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lele44g0640 Pkinase 2.7e-14 CL0016