Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0639 ATGGCGAAGATGTCACAGAGGAAGGTGAAGATCGCTTCGAACAGCATCACGCCTTCGAACAAGAAGACGAAGCGGACTCGCAAAAGCATTCCCAGAGATTCTCCTCCGCAACGCAGCTCCGTTTATCGAGGAGTCACTAGGCATCGTTGGACGGGTCGATATGAGGCTCATCTCTGGGATAAGAATTGCTGGAATGAATCGCAGAGCAAGAAAGGAAGACAAGCTACGCAAGAAGAAGCAGCCACAGCATATGATATGGCAGCCATAGAATATAGAGGAGTTAACGCCGTTACAAACTTTGACCTCAGCCGTTACCTCAATTGGCTCCGTCCTAAAACCCAAGACTCCAATGAAAAGCCTAATCCTATTAACAGCACCGAGTCTGCTGGATCAAACTCTACTAAGCCTGAACTTGAATTGGGTTTTGTGTCCCACCAGCTGATCAGTTCAAATTCCGACGACACAATGGATGCCCCACCACGATCTGGTGACGGGTCTCCCCCGTCATCGTCTTCACTAGGGCTCCTCTTGCAATCATCAAAGTTTAAGGAAATGCTGCAGAGGACTTCATCAGCTGGGGACCATCATTATTACACTGCGACTGCAACTTCAGAATCAAAGCCTCCTCGTCGTACATTTCCTGAAGATATTCAAACATTCTTTAGCTACACTGAAACTGATGACATCATATTTGGTGATTTGAGCTCAATTGCTGATGCTCCAATTTTCCATTGCGAGCTGGATGCTTAG 750 0.4707 MAKMSQRKVKIASNSITPSNKKTKRTRKSIPRDSPPQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQATQEEAATAYDMAAIEYRGVNAVTNFDLSRYLNWLRPKTQDSNEKPNPINSTESAGSNSTKPELELGFVSHQLISSNSDDTMDAPPRSGDGSPPSSSSLGLLLQSSKFKEMLQRTSSAGDHHYYTATATSESKPPRRTFPEDIQTFFSYTETDDIIFGDLSSIADAPIFHCELDA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0639 249 MobiDBLite consensus disorder prediction 1 45 - -
Lele44g0639 249 MobiDBLite consensus disorder prediction 112 135 - -
Lele44g0639 249 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 74 - -
Lele44g0639 249 SUPERFAMILY DNA-binding domain 40 103 IPR016177 GO:0003677
Lele44g0639 249 SMART rav1_2 41 107 IPR001471 GO:0003700|GO:0006355
Lele44g0639 249 Pfam AP2 domain 40 93 IPR001471 GO:0003700|GO:0006355
Lele44g0639 249 ProSiteProfiles AP2/ERF domain profile. 41 101 IPR001471 GO:0003700|GO:0006355
Lele44g0639 249 Gene3D AP2/ERF domain 41 103 IPR036955 GO:0003700|GO:0006355
Lele44g0639 249 MobiDBLite consensus disorder prediction 193 213 - -
Lele44g0639 249 MobiDBLite consensus disorder prediction 193 208 - -
Lele44g0639 249 CDD AP2 40 103 IPR001471 GO:0003700|GO:0006355
Lele44g0639 249 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Lele44g0639 249 PRINTS Ethylene responsive element binding protein signature 83 103 IPR001471 GO:0003700|GO:0006355
Lele44g0639 249 MobiDBLite consensus disorder prediction 150 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0639 Lele-ChrLele44 5109379 5112690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0639 19 105 AP2-EREBP Transcription Factor Family AT5G65510 51.000 1.66e-24 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele44g0639 AP2 7.8e-06 CL0081