Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0634 ATGATTGTCGTTCACTATAAAGGTGAAGAGAAGCATTTTGCTCCTGAAGAGATCTCCTCGATGGTTCTCACGAAAATGAAAGAAGTGGCTGAAGCATTTCTGAGTCAGACCATCAAGAACGCGGTGGTCACCGTACCTGCTTATTTCAACGATTCACAAAGGCAAGCAACAAAAGATGCTGGAGCCATTGCTGGGCTTAATGTGATGAGAATCATCAACGAGCCCACTGCTGCTGCTATTGCCTATGGTTTGGACAAGAAAGCTTCTAGAACCGGCGAGAAAAACGTGCTTATCTTCGACCTCGGAGGTGGTACTTTTGATGTTTCACTATTGACAATTGAACAAGGGATTTTTGAAGTGAAGGCTACTGCTGGTGATACACATTTGGGAGGTGAAGATTTTGATAACAGGCTCGTGAATCACTTCGCGGCTGAGTTCAAGAGGAAGAACAAGAAGGACATAAGTGGCAATGCAAGAGCTCTGAGAAGATTAAGAACTGCTTGTGAGAGGGCAAAGAGAACTCTTTCTTCCACAACACAAACAACAATAGAGATTGATTCTCTTTTTGAAGGTATTGACTTCTATGCGACCATTACAAGGGCGAGATTCGAAGAGCTAAACATGGACTTGTTCAGAAAATGCATGGAACCAGTGGAGAAATGTCTGAGAGACGCAAAAATCGACAAGAGTCGAGTTCACGATGTGGTTCTTGTTGGTGGCTCAACTAGAATCCCCAAGGTTCAGCAACTCCTGCAGGATTTCTTCAACGGCAAAGAACTCTGCAAGAGCATAAACCCAGATGAGGCCGTCGCCTACGGCGCTGCCGTTCAAGCCGCGATCTTGAGCGGCGAAGGTAACGAGAGAGTTCAAGATTTGCTTCTTCTCGATGTCACACCTTTAAGCCTCGGCATCGAAACTGCAGGTGGGGTCATGACTACGTTGATTCCCAGGAACACAACCATACCCACCAAGAAAGAACAAGTTTTCTCAACTTACTCGGATAACCAAACCAGTGTTCTTATCCAAGTCTATGAAGGTGAAAGGGCTAGAACCAAAGATAACAACTTACTTGGCACATTTGAACTCAAGGGAATCCCGCCAGCACCAAGAGGAGTTCCTCAGATCAATGTCTGCTTCGACATCGACGCGAATGGAATTTTGAATGTTTCTGCAGAAGATAAGACAGCAGGAGTGAAGAACAAGATCACGATTACGAATGATAAGGGAAGATTGAGTAAGGAGGAAATTGAGAGGATGGTTCAAGAAGCAGAGAAGTATAAATCAGAAGATGAACAGGTGAAGAAGAAGGTGGAAGCTAAGAATTCATTGGAGAATTATGCTTACAGTATGAAGAACACGATCAAGGACGATAAAGTTGGAGGGAAGCTTGATCCTTCTGATAAACAGAAGATTGAGAAGGCCATTGATGAAACAATGGAGTGGCTTGATAGGAACCAATTGGCTGAAGTTGATGAGTTAGAGGACAAGTTGAAGGAGCTTGAAGGACTGTGCAACCCAATCATTGCAAAGATGTATCAAGGTGGGGGTGCTGCTAGTGGAGACTCGCCCATGGGTGGCAGCGCTCAGATGCCCGGTGGCGGCAGTGGCGGTGGCTCTGCTGGCTCCGGTGCTGGGCCTAAGATTGAAGAGGTGGACTGA 1659 0.4569 MIVVHYKGEEKHFAPEEISSMVLTKMKEVAEAFLSQTIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEQGIFEVKATAGDTHLGGEDFDNRLVNHFAAEFKRKNKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLFEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDAKIDKSRVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNERVQDLLLLDVTPLSLGIETAGGVMTTLIPRNTTIPTKKEQVFSTYSDNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEQVKKKVEAKNSLENYAYSMKNTIKDDKVGGKLDPSDKQKIEKAIDETMEWLDRNQLAEVDELEDKLKELEGLCNPIIAKMYQGGGAASGDSPMGGSAQMPGGGSGGGSAGSGAGPKIEEVD 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0634 552 FunFam Heat shock 70 kDa protein 94 159 - -
Lele44g0634 552 Gene3D - 87 261 - -
Lele44g0634 552 Gene3D - 22 278 - -
Lele44g0634 552 FunFam Heat shock 70 kDa 286 440 - -
Lele44g0634 552 Gene3D - 2 21 - -
Lele44g0634 552 Coils Coil 416 436 - -
Lele44g0634 552 FunFam Endoplasmic reticulum chaperone BiP 8 93 - -
Lele44g0634 552 FunFam Heat shock 70 kDa 130 213 - -
Lele44g0634 552 SUPERFAMILY Actin-like ATPase domain 91 283 IPR043129 -
Lele44g0634 552 MobiDBLite consensus disorder prediction 512 552 - -
Lele44g0634 552 SUPERFAMILY Actin-like ATPase domain 2 86 IPR043129 -
Lele44g0634 552 Pfam Hsp70 protein 2 513 IPR013126 GO:0005524|GO:0140662
Lele44g0634 552 Gene3D Actin; Chain A, domain 4 130 213 - -
Lele44g0634 552 PANTHER HEAT SHOCK PROTEIN 70KDA 2 478 IPR013126 GO:0005524|GO:0140662
Lele44g0634 552 FunFam Heat shock protein 70 441 514 - -
Lele44g0634 552 Coils Coil 483 503 - -
Lele44g0634 552 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 438 518 IPR029048 -
Lele44g0634 552 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 287 444 IPR029047 -
Lele44g0634 552 FunFam Heat shock cognate 70 kDa protein 2 214 261 - -
Lele44g0634 552 ProSitePatterns Heat shock hsp70 proteins family signature 2. 98 111 IPR018181 -
Lele44g0634 552 ProSitePatterns Heat shock hsp70 proteins family signature 3. 235 249 IPR018181 -
Lele44g0634 552 PRINTS 70kDa heat shock protein signature 372 388 - -
Lele44g0634 552 PRINTS 70kDa heat shock protein signature 291 310 - -
Lele44g0634 552 PRINTS 70kDa heat shock protein signature 232 248 - -
Lele44g0634 552 PRINTS 70kDa heat shock protein signature 104 114 - -
Lele44g0634 552 PRINTS 70kDa heat shock protein signature 264 284 - -
Lele44g0634 552 PRINTS 70kDa heat shock protein signature 41 61 - -
Lele44g0634 552 Gene3D - 441 514 IPR029048 -
Lele44g0634 552 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 286 440 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0634 Lele-ChrLele44 5060767 5062425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0634 1 552 Calmodulin-binding Proteins AT1G16030 84.783 0.0 964