Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0628 ATGCCTTCCAGATCCTTCCCTTCCAGTCCCAACGCTCCAAGTTCAAGTTTTTTCATTAAAACCAGAGTCATCTTCCTCGCCCTCACAATCTCAGCTTCTGTTGTAATTCTATGCTCGATCATCTACTTTCTTTACCACTTATGGCATTCTATAGTACACAGAGCTAAAACCATCCCCTTTGATTCGAGTGCTCCTTTGAAGCTCGAAAGATTCTCATACAAAGAATTGAAGCAAGCCACCAATGGCTTCGACGTCGCCAATGTAATTGGTAAAGGAGGCTCTGGAACTGTCTTTAGAGGAACACTTAAAGATGGGAAATTGATTGCAATTAAGAGGCTAGACGCCTTGTCTTTACAAACAGAGCGAGAGTTTCAGAATGAGCTTCAGATTCTTGGTGGGTTAAGATCTCCTTTTATTGTAACCCTTTTGGGGTATTGTGTTGAAAAAAACAAGAGAGTTCTGGTGTATGATTACATGCCAAATAGAAGCTTGCAGGAGTCGCTTTTCGGAGATGACGATGGGTGTTTATGTTTGAGCTGGGAGAGAAGGTTCCACATCATTCTAGATGTTTCTAGAGCCTTGGAATTCTTGCACCTTGGTTGTGATCCTCCAGTGATTCATGGTGATGTGAAGCCAAGCAATGTTCTTCTTGATTCAAACTTCAGGGGGAAGATTTCAGACTTTGGATTGTCAAGGATCAAAGTGGAGAATGAATTTGGTGTAGATGTGTTTAGCCAGGACTTGGGGAAGAGTCAAGAACTATGGAAAAGCCAAGAAATTTCAGGTAATTTAACAGCTGAAACTACTCCGACTGCAGCTATTAGTACACCAGTTGAGAGTGTTAATAATGAAGTAGATTTTGCTTTAGCTTTGCAAGCATCTTCTTCATCTAAAAATAACAAGACATGTTTTAGTGTTAAAGCTTTGAGCTTGAATTCTTTCAATTACAACGCCAATATTGCAAATGAGAGTGAAATCAGGAGTTGTTGTAATGCAAAGGGAAAGGAAATATCAACTCTAGATAATATTGGTGGGGATGATTGGAATCATAAATTTGTTCCTTATGATGATGAGTTCTCTAGCATTGATCATAGTAAGGAATTAAGTTGTGTAAATGCTTCTTCTGTGGATGATGAGAAAATAAATGGGAAACAACAATGGGGAAAAGATTGGTGGTGGAGACAAGATGGAACTGATGAATTATGTAGCAGAGATTATGTGATGGAGTGGATTGGGAGTCAAATTTGTCCATCAAACCCAGATTGGATAGAAGAAAAGAAGAACGTTAATGAAAAACCAGAGTTGGAAACTTCTAGTCCTGTGGATCATCATAATGCAGATGAAGCAAATGGGCCCCAATTACAAGCATTTGTAGTAGGAGATGCCGATAATGTGGTTGGGAAGAAGAAAGAAGCGAGGGGGAAGAAAAACCGGAAGAAAAAACTGAGGAAGATGCAAGAATGGTGGAAAGAAGAGCACCTTGCTGAATTAAGAAAGAAGAGTAATAGTAGTAAGCTGAAGAATCTTCGAGCCAAGTGGAAGAAAGGCTTCAAAGTGCCACATTTTGATTTGGGAAGGAGGTTTTATCTTTGCAGGCGAAGAAGAAACTACCCCTGCGAAGAAGCTCAGGATGATGGGAGCGATCAAAATGGCGGGGAGTTCAGCTTCAGAAGAGGTTGGAGGAAGAAAAGTACTCGTTCCATCGGGAGTGACATGTGGAGCGGAGATCTTTTCAGCCGCGAGCTCAGCAGCACGACCAGCATGAGAGGAACACTGTGTTATGTTGCACCAGAATATGGAGGCTGTGGATATTTAATGGAGAAAGCTGATATTTACAGTTTAGGAGTTTTGATCCTTGTGATTGTATCAGGAAGAAGACCATTACATGTTCTTGCATCTCCAATGAAGTTAGAGAAGGCCAACTTAATAAGCTGGTGCAGGCACTTGGCTCATTCTGGTAACATTTTAGAGTTAGTAGATGAGAGACTGAAGGAATATTACAAGAAGGAGCAAGCAAGCTTGTGTATCAACTTGGCACTTGCTTGCTTACAAAAGATTCCAGAATTGAGGCCGGATATCGGCGACATTGTCAAGATTTTGAAGGGCGAAATGGAGCTTCCCCCGCTACCATTTGAGTTTTCACCATCTCCTCCTTCCAAGTTTTACCACAAATCAAGGACAAAACAGAACAGACCTACAGAATAA 2205 0.4104 MPSRSFPSSPNAPSSSFFIKTRVIFLALTISASVVILCSIIYFLYHLWHSIVHRAKTIPFDSSAPLKLERFSYKELKQATNGFDVANVIGKGGSGTVFRGTLKDGKLIAIKRLDALSLQTEREFQNELQILGGLRSPFIVTLLGYCVEKNKRVLVYDYMPNRSLQESLFGDDDGCLCLSWERRFHIILDVSRALEFLHLGCDPPVIHGDVKPSNVLLDSNFRGKISDFGLSRIKVENEFGVDVFSQDLGKSQELWKSQEISGNLTAETTPTAAISTPVESVNNEVDFALALQASSSSKNNKTCFSVKALSLNSFNYNANIANESEIRSCCNAKGKEISTLDNIGGDDWNHKFVPYDDEFSSIDHSKELSCVNASSVDDEKINGKQQWGKDWWWRQDGTDELCSRDYVMEWIGSQICPSNPDWIEEKKNVNEKPELETSSPVDHHNADEANGPQLQAFVVGDADNVVGKKKEARGKKNRKKKLRKMQEWWKEEHLAELRKKSNSSKLKNLRAKWKKGFKVPHFDLGRRFYLCRRRRNYPCEEAQDDGSDQNGGEFSFRRGWRKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAHSGNILELVDERLKEYYKKEQASLCINLALACLQKIPELRPDIGDIVKILKGEMELPPLPFEFSPSPPSKFYHKSRTKQNRPTE 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0628 734 PANTHER OS07G0586332 PROTEIN 1 729 IPR044576 -
Lele44g0628 734 Gene3D Phosphorylase Kinase; domain 1 59 158 - -
Lele44g0628 734 FunFam putative receptor-like protein kinase At1g80870 159 272 - -
Lele44g0628 734 FunFam Receptor-like serine/threonine-protein kinase At4g25390 557 706 - -
Lele44g0628 734 SUPERFAMILY Protein kinase-like (PK-like) 62 722 IPR011009 -
Lele44g0628 734 SMART serkin_6 83 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0628 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Lele44g0628 734 Pfam Protein kinase domain 85 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0628 734 Pfam Protein kinase domain 583 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0628 734 Gene3D Transferase(Phosphotransferase) domain 1 563 706 - -
Lele44g0628 734 FunFam Receptor-like serine/threonine-protein kinase At4g25390 52 158 - -
Lele44g0628 734 MobiDBLite consensus disorder prediction 711 734 - -
Lele44g0628 734 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Lele44g0628 734 ProSiteProfiles Protein kinase domain profile. 83 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0628 734 Gene3D Transferase(Phosphotransferase) domain 1 159 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0628 Lele-ChrLele44 4991789 4993993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0628 568 700 Receptor kinase-like Gene Family AT3G58690 31.343 5.40e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele44g0628 Pkinase 3.8e-27 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0719 41 17117412 17119616 Lele44g0628 44 4991789 4993993 hybridization
Lele42g0713 42 20178980 20181187 Lele44g0628 44 4991789 4993993 hybridization