Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0619 ATGGATTATTCGTCTTGGATTAACACTTCCTTGGACCTCAACCTTAACCCTAATTCCAGAGTCAACGAAGAGATTCCTAAAAAGGAGATGGAAAGCAAGTTGTTTGCATTGGAGTTGAAGTCATCGTCTCCTTCAAGACAAGAGACGAATGGTGATCTGGAGGAGGAATTGAAGAGGGTGAGTGCCGAAAACAAGAAGCTGACTCAAATGTTGACAGAGACGTGTGAGAATTACAATTCTTTGAGGAACCGCTTATCTGAATATATGAGAAAGAACAACAACAATAATAATTCAGAAAAGGAGATGAGCCCACCAAAGAAGAGGAAATCTGAAAGCAGCGATAATAACAATCCAATTGGGGTTTATGGTGGAAACAATAATAATATCAACTCTGAGAGCAGCTCAACTGATGAAGAATCAAGCAAGAAACCAAGGCATGAGATCATCAAAGCAAAAATCTCTAAACTTTATGTCAGAACACCAGAATCTGATACAACCCTTATTGTGAAGGATGGATATCAATGGAGGAAATACGGGCAAAAGGTCACCAGAGATAACCCTTGTCCAAGAGCTTACTTCAAATGCTCTTTTGCTCCCTCTTGCCCTGTCAAAAAGAAGGTTCAAAGAAGTGTGGAGGATCAATCCATTGTGGTGGCAACTTATGAAGGAGAGCATAATCATCCACAGCCTTCTCAAATGGAGACAGCTGGATCGGGTTCAAACCGAGGCCTAGTACCGAGTTCATCATCTTCTCTGAGGCCGCCTTCTTCTCCTCCTAAAGTTACAGTTGACATGAAAAGGTCCAAATCCTTCAATGAATCCACAAACTCAATTCCAAAGCTTGATTCATCTGAAGTCCCTCAGGTTTTGGTGGAACAGATGGCTACCTCGTTGACAAAGGATCCAAATTTCAGATCGGCACTTTTAGCAGCCATCTCAGGAAGAATGTTGAACAAGAATTAG 963 0.4154 MDYSSWINTSLDLNLNPNSRVNEEIPKKEMESKLFALELKSSSPSRQETNGDLEEELKRVSAENKKLTQMLTETCENYNSLRNRLSEYMRKNNNNNNSEKEMSPPKKRKSESSDNNNPIGVYGGNNNNINSESSSTDEESSKKPRHEIIKAKISKLYVRTPESDTTLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVEDQSIVVATYEGEHNHPQPSQMETAGSGSNRGLVPSSSSSLRPPSSPPKVTVDMKRSKSFNESTNSIPKLDSSEVPQVLVEQMATSLTKDPNFRSALLAAISGRMLNKN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0619 320 SUPERFAMILY WRKY DNA-binding domain 165 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele44g0619 320 SMART WRKY_cls 169 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele44g0619 320 MobiDBLite consensus disorder prediction 225 257 - -
Lele44g0619 320 FunFam WRKY transcription factor 40 154 231 - -
Lele44g0619 320 ProSiteProfiles WRKY domain profile. 164 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele44g0619 320 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 35 316 IPR044810 GO:0003700
Lele44g0619 320 Coils Coil 50 98 - -
Lele44g0619 320 Pfam WRKY DNA -binding domain 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele44g0619 320 MobiDBLite consensus disorder prediction 36 61 - -
Lele44g0619 320 MobiDBLite consensus disorder prediction 222 280 - -
Lele44g0619 320 MobiDBLite consensus disorder prediction 88 145 - -
Lele44g0619 320 Gene3D WRKY domain 154 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele44g0619 320 MobiDBLite consensus disorder prediction 114 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0619 Lele-ChrLele44 4903510 4904863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0619 4 320 WRKY Transcription Factor Family AT1G80840 49.847 1.85e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele44g0619 WRKY 3.6e-23 CL0274