Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0618 ATGGCCAGAGTCAACGAACAGGCCCTGCATCAGAACCAGAACGACAGCCCCAGGAGCATTCTGTTCAACAAGTACGAGATGGGGAGGCTCCTAGGTCAAGGAAATTTCGCCAAGGTGTATTACGCCAGGAACCTTGTGACGAACGAGAGCGTCGCGGTTAAGGTTATCAAGAAAGAGAAGCTAAAGAAAGAGAGGCTCGTGAGGCAGATCAAGCAAGAGGTATCTGTGATGCGATTGGTTCGTCACCCTCATATCGTCGAGCTCAAGGAAGTTATGGCGACAAAAGGCAAGATCTTTCTGGTTATGGAGTATGTTAAAGGTGGAGAATTGTTCTCCAAGGTTGCTAAAGGCAGGCTCAAGGAAGATGTTGCCAGAAAATATTTCCAGCAATTGATTAGCGCCATTGATTTCTGTCACAGCCGTGGAGTCACGCACCGTGATCTGAAACCTGAGAATCTACTTTTGGACGAGAACGAAGATCTCAAGGTTTCCGATTTCGGGTTGTCAGCGTTGCCGGAGCAGCGTCGGTCCGACGGGATGCTCATCACGCCGTGTGGAACGCCGGCATACGTGGCGCCGGAGGTGTTGAAGAAGAAAGGGTATGATGGATCGAAAGCTGATATTTGGTCATGTGGTGTGATTCTATATGCTCTGCTTTCTGGGTATCTTCCATTTCAGGGTGAGAATATTATGAAGATTTACAAGAAAGCATTCAAATCTGAGTACGAATTCCCGGATTGGATTTCCCCGGAAGCTAAGAATTTCATCTCTAATCTTCTAGTCGCCGACCCAGAAAGTAGATACTCGATCCCAGATATCATGAAGGATCCATGGTTTCAAATCGGATTCATGAGACCAATCGCGTTTTCGATAAAGAAAGAACCAGGTTTCGATTTCGACGAGGAGGAGAATAAAAATAATAATGAAGTGAAAGATCAGACAGAAGAAGAAAGAGGAGGAGAAGCAGTAGCAATAAGATCAGAGAAGCCATCACGACCATTTTACAATGCCTTCGAGATAATCTCATCATTATCAAATGGGTTTGATCTAAGGAGCTTGTTCGAGACACGAAAGAGGTCGCCGTCGATGTTCCTGTCGAAGCTTTCGGCTCCCACGGTTGTGGCGAAGCTGGAGACGGTGGCGAAGAAGCTGAATTTTAAGATCACAGGGAGGAAGGATTATAAGGTGAGGATGCAGGGGGAAACAGAGGGGAGAAAGGGGAAGCTGGCCATGACGGTGGAGGTGTTCGAGGTGACGCCGGAGGTGGCGGTGGTGGAATTATCCAAGTCTTCAGGCGATACACTCGAATATATAAAGTTCTGTGAGGAAGAAGTGAGGCCTGCACTTAAAGACATAGTCTGGAGCTGGCAAGGAGACAGTGCAAATAATAATAATAATTAG 1401 0.469 MARVNEQALHQNQNDSPRSILFNKYEMGRLLGQGNFAKVYYARNLVTNESVAVKVIKKEKLKKERLVRQIKQEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGRLKEDVARKYFQQLISAIDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRSDGMLITPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENIMKIYKKAFKSEYEFPDWISPEAKNFISNLLVADPESRYSIPDIMKDPWFQIGFMRPIAFSIKKEPGFDFDEEENKNNNEVKDQTEEERGGEAVAIRSEKPSRPFYNAFEIISSLSNGFDLRSLFETRKRSPSMFLSKLSAPTVVAKLETVAKKLNFKITGRKDYKVRMQGETEGRKGKLAMTVEVFEVTPEVAVVELSKSSGDTLEYIKFCEEEVRPALKDIVWSWQGDSANNNNN 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0618 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Lele44g0618 466 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 450 - -
Lele44g0618 466 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0618 466 Gene3D Transferase(Phosphotransferase) domain 1 18 334 - -
Lele44g0618 466 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0618 466 CDD CIPK_C 336 450 - -
Lele44g0618 466 MobiDBLite consensus disorder prediction 298 321 - -
Lele44g0618 466 Gene3D Kinase associated domain 1, KA1 335 455 - -
Lele44g0618 466 SUPERFAMILY Protein kinase-like (PK-like) 21 280 IPR011009 -
Lele44g0618 466 FunFam Non-specific serine/threonine protein kinase 330 454 - -
Lele44g0618 466 FunFam Non-specific serine/threonine protein kinase 18 321 - -
Lele44g0618 466 ProSitePatterns Protein kinases ATP-binding region signature. 31 58 IPR017441 GO:0005524
Lele44g0618 466 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0618 466 ProSiteProfiles NAF domain profile. 330 355 IPR018451 GO:0007165
Lele44g0618 466 FunFam Non-specific serine/threonine protein kinase 17 104 - -
Lele44g0618 466 Pfam NAF domain 334 389 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0618 Lele-ChrLele44 4875029 4876429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0618 20 464 CBL-interacting serine-threonine protein kinases AT5G25110 63.371 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele44g0618 Pkinase 1.1e-76 CL0016