Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0612 ATGGGCAATGAGGAAACTTCAGAAACTCCAGGGTCTTCTGGTAGTTCACTGTTTGGTAAAAAATCAATTCTCATGAACAAGTGTCTCAGTGCTGAAGAATGGACCTTAGAAGAAGGAGGCATACCCAAAGTCTCTTGCTCATTGCCTTCCCCTCCTGTCCCTCTTAGAAGAAAGGTAGGAGCTGAGTTTATAGGAACTTTGATTCTCATGTTTGCTGGTATTTCCACTGCTATTGTGAACCAAAGGACACAAGGTTCTGAGACTCTAATTGGGTGTGCTACCTCTACTGGTCTTGCTGCTATGGTCGTCATTATTGCCACCGGTCACATCTCCGGTGCTCATCTCAACCCGGCAGTCACCATTTCCTTCGCTGCTTTAAAGCACTTCCCATGGAAACATGTTCCTGTGTATATTTGCGCACAATTAATGGCATCCATATGTGCAGCATTTGCATTAAAAGGGATATTTCACCCCTTCATGAGTGGAGGAGTCACAGTTCCTTCAGGAGGAAATGCTCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTCACTCTCATGTTTGTGGTCACAGCAGTGTCCACCGACACAAGATCTGTGGGGGAGCTTGGTGGAATTGCAGTGGGAGCGACTGTCATGCTCAACATACTTATAGCCGGGCCAGCAACAGGAGGATCAATGAACCCAGTGAGAACACTAGGTCCAGCTATTGCTGCAAGTAACTACAAAGGCATATGGGTCTACCTCATTGCTCCCATACTAGGAGCTCTTGGTGGAGCAGGAATCTACACTGCAGTCAAGCTTCCAGAAGCAGACGGTGAAGCACAAGGAAAGGCTTCAACACCCTGA 846 0.4669 MGNEETSETPGSSGSSLFGKKSILMNKCLSAEEWTLEEGGIPKVSCSLPSPPVPLRRKVGAEFIGTLILMFAGISTAIVNQRTQGSETLIGCATSTGLAAMVVIIATGHISGAHLNPAVTISFAALKHFPWKHVPVYICAQLMASICAAFALKGIFHPFMSGGVTVPSGGNAQAFALEFIISFTLMFVVTAVSTDTRSVGELGGIAVGATVMLNILIAGPATGGSMNPVRTLGPAIAASNYKGIWVYLIAPILGALGGAGIYTAVKLPEADGEAQGKASTP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0612 281 ProSitePatterns MIP family signature. 114 122 IPR022357 -
Lele44g0612 281 Gene3D Glycerol uptake facilitator protein. 50 277 IPR023271 -
Lele44g0612 281 PRINTS Major intrinsic protein family signature 133 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele44g0612 281 PRINTS Major intrinsic protein family signature 177 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele44g0612 281 PRINTS Major intrinsic protein family signature 57 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele44g0612 281 PRINTS Major intrinsic protein family signature 96 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele44g0612 281 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele44g0612 281 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele44g0612 281 PANTHER AQUAPORIN NIP2-1 37 269 IPR034294 -
Lele44g0612 281 SUPERFAMILY Aquaporin-like 54 270 IPR023271 -
Lele44g0612 281 Pfam Major intrinsic protein 55 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele44g0612 281 FunFam Aquaporin NIP2-1 45 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0612 Lele-ChrLele44 4795105 4797437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0612 9 279 Major Intrinsic Protein MIP AT1G80760 70.383 3.51e-138 390