Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0610 ATGGACCTTCTACAAAGATCAGCGCGACCATCATGTTCATCTGAAAATTTGAACTTCATCTCATTTTCTTCAGATGCTCCACCATCACCAGCAGCATGCACAAAACCCCCCACAATGGAGAGAGACACACAAAAGGAAGATCATCAAACACACCCACATGTTCTGCTGAATCTAAATCTCTCTAATGAGGAATCATCGGATGGATCAAGGCCGGAACTCAACCTCATCAATTGTTTTGATCATGCCAAGTCATCCTTAAACTCCTCAGAATCTTCTTCTCATGACTTGGAACCGAGGATTTTCTCATGCAACTACTGCCAGAGGAAATTTTATAGTTCACAGGCCCTTGGAGGACACCAGAATGCACACAAGCGTGAGAGGACTTTGGCGAAAAGAGGGCATAAAGTTGGAGCTGCATCAGTTTCAGTAGAATTTGGACAGAGGTACACTAGCCTGGCTTCTCTTCCCTTGCATGGCTCATATAACAACAACAAATCACTTGGGATTCAAGCACATTCTATGATTCACAAGCCCTCTCATCAAGCTCCCATTCTCGGTTTACCGCGTTTCCATGGTCAAAATTCCTGGTGGAGGCAGCCTTTAGATTCGCAAGCAGCAATTGGGAAGCTTCCTTCTGGAAAAGTTCATATGGGAGATGAAAAAACCGAAGCTTCCTTTTCCGGTGGAGTTTCAAGGTTAGCTAAGTTTTCTCCAAATATGGTGGTGAGAGAGGGAATTGGAGCTTACTGGTTGGGAAGTGTTACTCATGTAAAATCTAAACAAGAAGAGTTGCAGAACCTTGACTTGTCCCTCAAACTCTAA 822 0.4392 MDLLQRSARPSCSSENLNFISFSSDAPPSPAACTKPPTMERDTQKEDHQTHPHVLLNLNLSNEESSDGSRPELNLINCFDHAKSSLNSSESSSHDLEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKVGAASVSVEFGQRYTSLASLPLHGSYNNNKSLGIQAHSMIHKPSHQAPILGLPRFHGQNSWWRQPLDSQAAIGKLPSGKVHMGDEKTEASFSGGVSRLAKFSPNMVVREGIGAYWLGSVTHVKSKQEELQNLDLSLKL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0610 273 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 11 273 IPR044246 GO:0009788
Lele44g0610 273 Coils Coil 257 273 - -
Lele44g0610 273 SUPERFAMILY beta-beta-alpha zinc fingers 98 128 IPR036236 -
Lele44g0610 273 FunFam Zinc finger protein 2 79 148 - -
Lele44g0610 273 Gene3D Classic Zinc Finger 80 148 - -
Lele44g0610 273 MobiDBLite consensus disorder prediction 20 49 - -
Lele44g0610 273 ProSitePatterns Zinc finger C2H2 type domain signature. 103 123 IPR013087 -
Lele44g0610 273 ProSiteProfiles Zinc finger C2H2 type domain profile. 101 128 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0610 Lele-ChrLele44 4771051 4771872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0610 56 273 C2H2 Transcription Factor Family AT5G25160 43.966 8.80e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele44g0610 None None None