Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0604 ATGGCAGGCATGGATGTCTTGTGTAGTGACAAGACTGGTACTCTAACATTGAATAAGCTCACAGTGGACAAGGCCTTAGTTGAGATTTTTGAAAAAGATATAGACAAGGACATGTTGATTTTGCTTGGAGCTAGGGCCTCTAGGGTGGAGAACCAGGATGCTATTGATGCTTGCATTGTTGGAATGTTGGGTGATCCAAAGGAGGCAATTGGCATAGAGTTAGCAAAGATTATCTCTCTCTGCAATCTCCGGGGTGATATGCTGAAAAGATCTCATGCCATTATTGACAAGTTCGCTGACCGTGGTCTTCGATCTCTTGCTGTTTGTAGACAAGAAGTGCCAGAGAAGACAAAGGAAAGTGCAGGAGGACCATGGCATTTTGTTGGTCTCTTGCCTCTCTTTGATCCACCAAGACATGACAGTACAGAGACCATCAGAAAAGCTCTTCAACTCGGAGTAAATGTGAAGATGATCACTGGTGACCAACTCGCTATCGGTAAAGAGACTGGTCGCAGGCTTGGCATGGGAAGCAACATGTACCCTTCTTCCTCTCTCCTTGGTGAACACAAGGATGAGTCTGTTGCTGCTCTTCCCATTGATGAGCTTATTGAAAAGGCTGATGGCTTTGCTGGAGTATTTCCTGAGCACAAGTACGAGATTGTGAAGAGGCTGCAAGATAGGAAGCACATTTGTGGCATGACTGGAGATGGTGTGAATGATGCCCCTGCATTGAAGAGAGCAGATATTGGAATTGCAGTGGCAGATGCAACCGATGCAGCTCGAAGCGCGTCTGACATAGTCCTAACAGAACCCGGTCTGAGTGTGATTATAAGTGCAGTGTTAACAAGCAGGGCTATTTTCCAGAGGATGAAGAACTACACCATTTATGCTGTCTCTATTGCAATCCGTATTGTTCTGGGATTTATGCTCCTTGCTCTTATCTGGAAATACGATTTCTCGCCTTTCATGGTCTTGATCATCGCTATACTCAATGATGGGACCATCATGACCATTTCCAAGGACAGAGTGAAGCCATCTCCAATTCCTGATTCCTGGAAACTCAATGAGATTTTTGCTACTGGCGTTGAACGTTTTGGAGTTAGATCTATCAGACACAACCCAGAAGAGCTCACTGCAGCTGTTTACCTTCAAGTGAGTATAGTGAGTCAAGATCTCATCTTTGTCACTCGTTCGAGGAGCTGGCCTTATGTTGAACGCCCTGGTCTCTTGCTTGTTGGAGCCTTTCTCATAGCACAATTGATCGCGACCTTATTAGCCGTGTATGCAAACTGGGAATTTGCAAGGATTAAAGGAGTTGGGTGGGCCTGGGCTGGTGTGATTTGGCTCTACAGCATCATCGTCTACATTCCTTTAGATATCTTAAAGTTCATCATCCGATATGCATTGAGTGGCAAGGCCTGGAACAACATTACTGAGACCAGGGTTGCTTTCACAAACAAGAAAGACTATGGAAGGGGAGAGAGAGAAGCACAATGGGCTGCAGATCAACGCACAATGCATGGTTTGAATCCTCCTGAAGCAGAAGATATCTTGAAAGACAAAACAGATTACAGAGAACTCACTGAAATTGCAGAACAAGCAAGGAAACGTGCTGAAGTTGCAAGGTTGAGGGAGCTTCACACACTGAAGGGGCATGTGGAATCTGTGGTGAAGCTAAAGGGACTTGATATTGAGACAATTCAGCAGAACTACACTGTGTGA 1722 0.4518 MAGMDVLCSDKTGTLTLNKLTVDKALVEIFEKDIDKDMLILLGARASRVENQDAIDACIVGMLGDPKEAIGIELAKIISLCNLRGDMLKRSHAIIDKFADRGLRSLAVCRQEVPEKTKESAGGPWHFVGLLPLFDPPRHDSTETIRKALQLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHKDESVAALPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIAIRIVLGFMLLALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLNEIFATGVERFGVRSIRHNPEELTAAVYLQVSIVSQDLIFVTRSRSWPYVERPGLLLVGAFLIAQLIATLLAVYANWEFARIKGVGWAWAGVIWLYSIIVYIPLDILKFIIRYALSGKAWNNITETRVAFTNKKDYGRGEREAQWAADQRTMHGLNPPEAEDILKDKTDYRELTEIAEQARKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQNYTV 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0604 573 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 209 317 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g0604 573 PRINTS P-type cation-transporting ATPase superfamily signature 234 253 - -
Lele44g0604 573 PRINTS P-type cation-transporting ATPase superfamily signature 129 140 - -
Lele44g0604 573 PRINTS P-type cation-transporting ATPase superfamily signature 257 269 - -
Lele44g0604 573 PRINTS P-type cation-transporting ATPase superfamily signature 8 22 - -
Lele44g0604 573 PRINTS P-type cation-transporting ATPase superfamily signature 151 161 - -
Lele44g0604 573 Coils Coil 524 544 - -
Lele44g0604 573 ProSitePatterns E1-E2 ATPases phosphorylation site. 10 16 IPR018303 -
Lele44g0604 573 Gene3D - 522 573 - -
Lele44g0604 573 SUPERFAMILY HAD-like 4 281 IPR036412 -
Lele44g0604 573 Gene3D - 131 271 IPR023214 -
Lele44g0604 573 PRINTS H+-transporting ATPase (proton pump) signature 234 250 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g0604 573 PRINTS H+-transporting ATPase (proton pump) signature 206 222 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g0604 573 PRINTS H+-transporting ATPase (proton pump) signature 265 290 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g0604 573 PRINTS H+-transporting ATPase (proton pump) signature 382 403 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g0604 573 PRINTS H+-transporting ATPase (proton pump) signature 91 109 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g0604 573 FunFam Membrane H(+)-ATPase1 74 134 - -
Lele44g0604 573 Pfam haloacid dehalogenase-like hydrolase 4 248 - -
Lele44g0604 573 Gene3D - 361 468 - -
Lele44g0604 573 PANTHER CALCIUM-TRANSPORTING ATPASE 1 69 - -
Lele44g0604 573 FunFam Plasma membrane ATPase 128 282 - -
Lele44g0604 573 Gene3D - 73 130 IPR023299 GO:0000166
Lele44g0604 573 Gene3D - 20 72 IPR023299 GO:0000166
Lele44g0604 573 SUPERFAMILY Calcium ATPase, transmembrane domain M 283 469 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0604 Lele-ChrLele44 4716098 4719256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0604 1 573 Primary Pumps ATPases AT3G42640 73.016 0.0 922