Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0601 ATGAATGATAATTTCTTCTTCCTTCCAGCTAATCCCACAACACCACGCAGCTGGATTACAAACGCGCCCCCTTCACCGCCACCTCTGGAGGGAATCGCCGCCGTGGTGGGTCAGCACGTGCTCTTCGGACACAACCACGGATCCACCTACGCCACTGCTAACATTAACAGCAAAAACGACAACCTCAACGGCTCAAAAGCTTTCATGTCGGTGCAGAAACGAGCAGACAAGAGCTTAACAACGGATGGTAGTAGTCTGTCGGTGAACAAGAGCTACAGGGGAGTGAGGAAGAGGCCGTGGGGGAGGTGGTCGGCGGAGATACGCGACCGAATCGGACGGTGCCGGCACTGGCTGGGTACGTTCGACACGGCAGAGGAAGCGGCCCGTGCGTACGACGCGGCCGCGAGGCGACTGAGAGGCGCTAAAGCAAGGACCAACTTCGAAATACCTTCAGTACTTCCATTGCCATCACCTTCTTCTTCGTCTTCAAATTCGAGCTCAGAAGTGAAAAGCAAAGGGAAGGCCACGGGGAATGGTGCTAAGAAATGCTGTGTGGTTAACTCTGTATCTCAATTGTTCGGAGTGGGGCCTGAGACTATGAGAGAGAACCATGATCGTAATGAGAAGAAGACAAGTTCTTCAGGTTTCGGTAACAATGTAGAACTAGACTTAAAGCTAGGTAGATCCACTAGAATGGTCATGTAG 705 0.522 MNDNFFFLPANPTTPRSWITNAPPSPPPLEGIAAVVGQHVLFGHNHGSTYATANINSKNDNLNGSKAFMSVQKRADKSLTTDGSSLSVNKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNFEIPSVLPLPSPSSSSSNSSSEVKSKGKATGNGAKKCCVVNSVSQLFGVGPETMRENHDRNEKKTSSSGFGNNVELDLKLGRSTRMVM 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0601 234 Gene3D AP2/ERF domain 90 149 IPR036955 GO:0003700|GO:0006355
Lele44g0601 234 PRINTS Ethylene responsive element binding protein signature 114 130 IPR001471 GO:0003700|GO:0006355
Lele44g0601 234 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Lele44g0601 234 ProSiteProfiles AP2/ERF domain profile. 91 148 IPR001471 GO:0003700|GO:0006355
Lele44g0601 234 MobiDBLite consensus disorder prediction 150 180 - -
Lele44g0601 234 CDD AP2 90 149 IPR001471 GO:0003700|GO:0006355
Lele44g0601 234 MobiDBLite consensus disorder prediction 152 173 - -
Lele44g0601 234 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 70 205 - -
Lele44g0601 234 Pfam AP2 domain 91 140 IPR001471 GO:0003700|GO:0006355
Lele44g0601 234 SUPERFAMILY DNA-binding domain 91 148 IPR016177 GO:0003677
Lele44g0601 234 SMART rav1_2 91 154 IPR001471 GO:0003700|GO:0006355
Lele44g0601 234 Coils Coil 124 144 - -
Lele44g0601 234 FunFam Ethylene-responsive transcription factor 2 90 149 - -
Lele44g0601 234 MobiDBLite consensus disorder prediction 196 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0601 Lele-ChrLele44 4693811 4694515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0601 76 167 AP2-EREBP Transcription Factor Family AT1G12980 57.609 1.73e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele44g0601 AP2 2.8e-15 CL0081