Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0599 ATGGAGGGATCTGGAGAGAATTGGCCCTATTATCAGATGGAAATGAACACGAATCTGGAGAAAGCGATTAACTATGTAAGCTATCTGGAGGGGAGAGTAAGAGAGCTTGAGAATCAGAACAAGACAAGTGTGGAGTCGTGCCGAGCTTATAATAATAACAACTACTACGACGGCGCGTCGTCGTCCTGGGAGAGGAACGTGGACGACGAGTGGTACGAAGCGTCGCTGCCGGAGGTGAAAGCTAGGGTTTCGGAGAATGAAGTGCTGATAATAATTCACTGTGAGAAACAAAAGGGACTTATGCACAAAATATTGTCTCAGCTTGAAACTCTTCATCTCTCTGTTATCAGTAGCAGCGTCTTGCCCTTTGGGAAATTCACTCTTGACATCACCATCGTTGCTCAGATGGGGGAGGGATTCAACAAGACGGTGAGTGGCATAGTGAAAAGTTTGAGACGAGCCATCTCCAAGTAA 474 0.4641 MEGSGENWPYYQMEMNTNLEKAINYVSYLEGRVRELENQNKTSVESCRAYNNNNYYDGASSSWERNVDDEWYEASLPEVKARVSENEVLIIIHCEKQKGLMHKILSQLETLHLSVISSSVLPFGKFTLDITIVAQMGEGFNKTVSGIVKSLRRAISK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0599 157 Coils Coil 19 53 - -
Lele44g0599 157 PANTHER BHLH TRANSCRIPTION FACTOR 19 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0599 Lele-ChrLele44 4652592 4654360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0599 12 156 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.136 9.59e-27 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0479 38 3857618 3859711 Lele44g0599 44 4652592 4654360 CCT
Lele39g0917 39 18124479 18128989 Lele44g0599 44 4652592 4654360 CCT
Lele40g0452 40 3723035 3725128 Lele44g0599 44 4652592 4654360 CCT
Lele41g0748 41 17397299 17398508 Lele44g0599 44 4652592 4654360 hybridization
Lele42g0745 42 20484126 20485848 Lele44g0599 44 4652592 4654360 hybridization