Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0574 ATGTCTGCTGCGGTTTGTGGGAGCAAGAGATCTTTCTTTGAAGATATTCCTCCGTCACCTCCGGTATCGAAGAGGCTTCGTTGCTCATCTTCTCCAATTCGTTTCTCCGCACCGAGTCTCATCGATCAGCTTCAGGCGGTGTTCCCTCAAATGGAAGTTCAGCATCTTGAGATAGCTCTCCAAGAATGTGGAAATGATCTAGATGTTGCTACCAAAAGCTTGCATGAGCGTTGCTTGGGATCTGCTGATGGAAATTCTGGTGCTGCTGAACAATCCAATGCTAATGTGGTAACAGGTACCTTGAGAGATGATGGGCGTGCTTCTGCTTCTGAGAACCAATCAACTTCAAACGACCTTCCTGCAGATGGAGCAGAATGGGTTGACTTGTTTGTGAGGGAAATGATGAGTGCTATCAGTGTTGATGATGCTAGAATCCGTGCTTCTAGAATGTTGGAGGTTTTAGAGAGATCAATCAGTGGCCATGCAAGTGCTGAGGCAGCACACGTTATTCAAAAGGAAAATATGATGTTGAAAGAGCAAATTGAAGGGCTGACTAGGGAGAATACTATTTTAAAGAGTGGTTTTAAAATCCAGCATGAACGTCAGATTGAGTACGAAAATAAGAGTCAAGAGTTGCAGCAGATGAAGCAATTGATGGCTCAGTACCAGGAACAGTTGAGAACTCTTGAGGTGAATAACTATGCTTTGGCAATGCATCTGAAGCAGGCTCAGCAGTGCAACTCCTTTCCGGGGCACTTCAATCCTGATGTCTTCTAA 777 0.4479 MSAAVCGSKRSFFEDIPPSPPVSKRLRCSSSPIRFSAPSLIDQLQAVFPQMEVQHLEIALQECGNDLDVATKSLHERCLGSADGNSGAAEQSNANVVTGTLRDDGRASASENQSTSNDLPADGAEWVDLFVREMMSAISVDDARIRASRMLEVLERSISGHASAEAAHVIQKENMMLKEQIEGLTRENTILKSGFKIQHERQIEYENKSQELQQMKQLMAQYQEQLRTLEVNNYALAMHLKQAQQCNSFPGHFNPDVF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0574 258 Coils Coil 167 187 - -
Lele44g0574 258 Coils Coil 205 232 - -
Lele44g0574 258 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
Lele44g0574 258 SUPERFAMILY UBA-like 39 80 IPR009060 GO:0005515
Lele44g0574 258 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 258 - -
Lele44g0574 258 CDD CUE 39 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0574 Lele-ChrLele44 4465341 4468198 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0461 38 3734753 3738155 Lele44g0574 44 4465341 4468198 CCT
Lele39g0932 39 18234998 18239140 Lele44g0574 44 4465341 4468198 CCT
Lele40g0433 40 3572382 3575928 Lele44g0574 44 4465341 4468198 CCT
Lele41g0775 41 17611031 17614078 Lele44g0574 44 4465341 4468198 hybridization
Lele42g0767 42 20694457 20699388 Lele44g0574 44 4465341 4468198 hybridization