Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0572 ATGGCCTTTTGCCCAAGCTTTTGTTTTGGAAAGGGTTCGGATCGCAAAGCACGAGGGAAGGCGCAACCAACATGGCGAGTCTTTTCCTTAAAGGAGCTACACTCAGCCACAAATAACTTCAATTATGATAATAAACTTGGAGAAGGTGGATTTGGCAGTGTTTATTGGGGCCAGCTTTGGGATGGATCACAAATCGCAGTGAAAAGATTGAAAGTATGGAGCAACAAAGCAGATATGGAATTTGCTGCTGAAGTTGAGATATTGGCAAGAGTTCGACACAAGAATCTTCTTAGCCTGCGGGGCTATTGCGCTGAAGGACAGGAACGGTTAATCGTATATGACTATATGCCAAATTTGAGCTTACTCTCTCATCTTCATGGACAGCACTCGGTAGAATGCCTTTTGAATTGGAGCCAACGGATGAGTATTGCTATCGGATCAGCAGAGGGAATCGCATATCTCCACCACCAATCAACTCCACACGTCATCCACAGAGACATTAAAGCAAGTAATGTGCTCTTGGATGCAGATTTGGGGGCTCAGGTTGCAGATTTCGGTTTCGCTAAGTTGATCCCTGAGGGGGTGACTCATGTGACTACAAGAGTTAAGGGTACCCTTGGCTATCTTGCACCTGAGTATGCTATGTTAGGTAAAGCATCTGAGAGTTGTGACGTCTACAGTTTTGGAATTCTCTTGCTGGAACTCGCAACTGGCAGGAAACCAATTGAGAAACTGAGTGCGATGGTGAAGCGGTCAATAACCGATTGGGCACTACCGTTGGTTTTAGAGAATAAATTTTGTGAAATTGTAGATGCAAGACTAAATGGTGACTACGTGGAGGAAGAGCTTAAAAGGATTGTTTATGTTGCACTTGTTTGTGCTCAGAATCAGCCGGAGAAGAGACCCAACATGCTGGAGGTGGTAGAGCTATTGAAGGGAGAATCTAAGGTTAAGTGTTCTCAGCTAGAGAATCATGAACTTTTCAGAAGCCCTCAACCTGCTGATTCCAACGACGATGACAGGATACAACCTGCTGAAGATAGTTCTGACTTTATATCAGCAGCAGATGAATCAAAACCTGAGTTGAAGGAGACCCCTGAACCATAA 1107 0.4444 MAFCPSFCFGKGSDRKARGKAQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAAEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSVECLLNWSQRMSIAIGSAEGIAYLHHQSTPHVIHRDIKASNVLLDADLGAQVADFGFAKLIPEGVTHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGRKPIEKLSAMVKRSITDWALPLVLENKFCEIVDARLNGDYVEEELKRIVYVALVCAQNQPEKRPNMLEVVELLKGESKVKCSQLENHELFRSPQPADSNDDDRIQPAEDSSDFISAADESKPELKETPEP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0572 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Lele44g0572 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Lele44g0572 368 Pfam Protein tyrosine and serine/threonine kinase 42 311 IPR001245 GO:0004672|GO:0006468
Lele44g0572 368 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0572 368 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Lele44g0572 368 MobiDBLite consensus disorder prediction 332 368 - -
Lele44g0572 368 Gene3D Phosphorylase Kinase; domain 1 11 115 - -
Lele44g0572 368 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0572 368 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 335 - -
Lele44g0572 368 MobiDBLite consensus disorder prediction 325 368 - -
Lele44g0572 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Lele44g0572 368 Gene3D Transferase(Phosphotransferase) domain 1 116 328 - -
Lele44g0572 368 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Lele44g0572 368 CDD STKc_IRAK 46 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0572 Lele-ChrLele44 4443951 4446881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0572 28 314 Trihelix Transcription Factor Family AT1G70460 50.859 2.64e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele44g0572 PK_Tyr_Ser-Thr 8.1e-44 CL0016