Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0539 ATGAGTCCACGGCCAAAGAGTGAAGGAACGCTTGAGTTTGAAGGAGCACGTCGTTCAACACTTGCCCTTTGGTCTCCTATTATTACCATTTGTCTCCAAGCATTATTGAGTCTTTGAATGGAGCACTTGAAGGCATCTTTCAAGGGTGTAGTTGATGATGTTCGAGGAAGAGCGAAGTGTTACAAAGAAGATTGGATTTCTGGTCTCTGTTCAGGAACTGGGATATTGGCTCCAGCCACTTACATCTTCTTCGCTTCTGCACTTCCTGTCATTGCCTTTGGAGAACAACTCAGTAGAGACACAGATGGAAGCTTGAGCTCGGTAGAAACACTGGCTTCAACTGCTATATGTGGAATCATACACTCAATTCTTGGAGGCCAACCTTTGCTTATAGTAGGAGTTGCAGAACCCACTATCATCATGTACACTTACTTGTACAATTTTGCTAAAAACAGGGATGATTTAAGGCGACAACTCTTCTTGGCTTGGGCTGGATGGGTTTGTGTTTGGACAGCTTTATTTTTGTTTCTTCTAGCTACATTCAATGCTGGTGTCATTATCAATAGATTCACGAGAATTGCTGGTGAGCTTTTTGGCATGTTGATCACTGTATTGTTCATTCAAGAGGCTATTAAGGGAGTGGTAAGTGAGTTTAAGGTTCCAAAAGCGGAAGACCCAACATCAGAGAAGTACAAATTTCAATGGCTATATGCAAATGGATTACTTGGAATCATATTCACCGTTGGCCTTCTCTTCTGTTCTTTGAAGACCAGAAAAGCCAGCTCATGGTTATATGGAACAGGCAAGTTGAGAAGTTTCATTGCAGACTATGGAGTTCCTTTAATGGTGGTGGTGTGGACAGCTTTGTCTTTCACAGTACCAAGGGAACTTCCCTCTGGAATCCCTAGAAGGCTCTTTACCCCTCTTGCTTGGGAATCTTCTTCTTTGCACCATTGGACAGTCCTCAAAGACATGGGGAAGGTTCCACCTGCATATATTTTTGGTGCTATTATACCGGCGTTGATGATTGCGGGTCTTTACTTCTTCGATCATAGCGTTGCTTCTCAAATGGCACAACAGAACGAATTCAATCTGAAGAAGCCTTCTGCTTATCATTATGATGTTTTGCTGCTAGGAGTCATGACTTTGCTTTGTGGGTTGCTTGGTTTGCCGCCTTCCAATGGAGTTCTTCCTCAATCCCCCATGCACACCAAAAGCCTCGCTGTTCTCAAGAAACAGTTGATTCGGAGGAAGATGATGGAAAGTGTGAAGGAAAGCAAAAGGCGCAATGCAAGTAACTCTGAGATCTATGGAAGCATGCAAGCCGTGTTTGTAGAAATAGACAAAAGCCCAGTTTCTTCAGTGGCAAAAGAATTGAAGGACCTGAAAGAAGCAGTCCTGAAAGAGGAAGAGAAAAAGGAAACATTTGATCCTGAGAGACACATTGATGAACATCTGCCCATTAGAGTGAAAGAGCAAAGAGTGAGCAATCTGTTACAAGCAATACTTGTTGGAGCATCTGTGTTTGCTATGCCTCTCTTAAAGAAGATACCCACTTCAGTTCTGTGGGGTTACTTTGCTTACATGGCCATTGATAGTCTTCCAGGAAACCAATTCTGGGAAAGGATACTATTCCTTCTGGTGGCCCCTAATAAGAGATACAAGGTATTGGAAGGGAACCATGCTTCATTTGTGGAGACAGTTCCAATGAGAGGGATAGTGTTCTTCACACTGTTTCAATTTGTGTATTTCTTGGTTTGTTTTGGGGTGAAATGGATTCCAATAGCAGGAATATTGTTTCCCTTGCCCTTCTTTGTGCTCATCATAATAAGGCAGTACCTTCTTCCCAAGCTCTTCAATCCTCACCATTTAAGGGAACTTGATGCTGCTGAATATGAAGAGATTACTTGTGCTCCAAGGCGTCTTTCCTTCAAGCTCTCTTCCAAGGAAGTAGAATCGAACGGGGTGGGATCAAGGGGAATGGAAGATGGAGAGATATTAGATGAGACTACAACTGGTAGGGGGGAGTTGAAGGTCAGAAATGTTAGCTTTAGCGAGGAAAGACATGCACAGGGATTGCAAGTGTATCCCGGTGAAGTAGAGGGGGGAATGGATTCCAATATCTAA 2127 0.4316 MSPRPKSEGTLEFEGARRSTLALWSPIITICLQALLSLXMEHLKASFKGVVDDVRGRAKCYKEDWISGLCSGTGILAPATYIFFASALPVIAFGEQLSRDTDGSLSSVETLASTAICGIIHSILGGQPLLIVGVAEPTIIMYTYLYNFAKNRDDLRRQLFLAWAGWVCVWTALFLFLLATFNAGVIINRFTRIAGELFGMLITVLFIQEAIKGVVSEFKVPKAEDPTSEKYKFQWLYANGLLGIIFTVGLLFCSLKTRKASSWLYGTGKLRSFIADYGVPLMVVVWTALSFTVPRELPSGIPRRLFTPLAWESSSLHHWTVLKDMGKVPPAYIFGAIIPALMIAGLYFFDHSVASQMAQQNEFNLKKPSAYHYDVLLLGVMTLLCGLLGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMMESVKESKRRNASNSEIYGSMQAVFVEIDKSPVSSVAKELKDLKEAVLKEEEKKETFDPERHIDEHLPIRVKEQRVSNLLQAILVGASVFAMPLLKKIPTSVLWGYFAYMAIDSLPGNQFWERILFLLVAPNKRYKVLEGNHASFVETVPMRGIVFFTLFQFVYFLVCFGVKWIPIAGILFPLPFFVLIIIRQYLLPKLFNPHHLRELDAAEYEEITCAPRRLSFKLSSKEVESNGVGSRGMEDGEILDETTTGRGELKVRNVSFSEERHAQGLQVYPGEVEGGMDSNI 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0539 708 Gene3D Helical hairpin bin 57 99 - -
Lele44g0539 708 Coils Coil 452 472 - -
Lele44g0539 708 Pfam HCO3- transporter family 237 414 IPR011531 GO:0006820|GO:0016020
Lele44g0539 708 Pfam HCO3- transporter family 47 221 IPR011531 GO:0006820|GO:0016020
Lele44g0539 708 Pfam HCO3- transporter family 488 578 IPR011531 GO:0006820|GO:0016020
Lele44g0539 708 PANTHER ANION EXCHANGE PROTEIN 44 636 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0539 Lele-ChrLele44 4209162 4213764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0539 40 707 Antiporters AT1G74810 65.793 0.0 936
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0818 41 17887775 17892799 Lele44g0539 44 4209162 4213764 hybridization
Lele42g0806 42 20947397 20954247 Lele44g0539 44 4209162 4213764 hybridization