Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0515 ATGACTGGAGCTCCACTTTCTATTATGGAGTTGGCGACAGAGCTTTTGAGCTGTGGGGCTAGTGTCTCTGCTGTCGTGCTTAGCAGGAAAGGTGGCTTGTTGCCAGAGCTAACTAGGAGACAAATCAAGGTGCTTGAGGATAGAGCTGATGACAGCTTCAAAACTGCAATGAAGTCTGATCTAGTAATTGCTGGATCAGCTGCTTGTGCTTCATGGATCGGTAAGAAGATGATAGAATTTTCTAATCAATCTCAAAAACTGTCTCAATATCTTATGAGGAAACCATTATCCTCTTCTGTGTTCCCAGAACAATATATTGAAAGTTTTCCTGCTGGTGCAAGTCAAGTTGCTTGGTGGATTATGGAAAACCGACGAGAGTACTTTGATCGTTCAAAGGCTGTCCTGCACAGAGTAAAACTGCTGGTATTCCTTTCTGAGTTGCAATCTAAGCAATGGCAAAAATGGTGTGATGAAGAAAACATAAAACTGAGGTATCAGCCTGCACTGGTTCCATTGTCCGTGAATGATGAATTGGCTTTTGTAGCTGGCATTCCTTCTACACTTAATACTCCGTCCTTTAGTGCTGAGAAAATGTTAGAGAAAAGACAATTGTTAAGAGATGCAGTCCGAAAGGAAATGGGCTTGACTGATAATGATATGCTTGTGATGACTTTGAGTAGCATAAACCCAAGTAAGGGTCAGCTATTGCTTCTTGAATCAGCAAGCACGATAGTAGAACATGGACGGTTGCAAGATAGTAAAACCACGAAGAAATCATCAGATGTGGGAGAAGGCCTATCTACCCTGGCTAGAAGACATCATATTAGAAGTTTGATGCAATTGTTGAATGCTGACAACAGAGCTTTGCATGATATCTCAAGCATACCTTTGAACAGGAAGGTGTTGTCAAACAATGAAACATCCTTGGAGAAATCTCTCAGAATTCTTATTGGTTCTGTTGGAAGTAAAAGTAACAAAGTGGATTATGTTAAAGGCCTTCTGACTTACTTATCTCAGCGTTCAAACTTGTCAAAGTCAGTTTTGTGGACTCCAGCAACAACACGTGTTGCCTCACTTTATTCTGCTGCAGATGTTTATGTCATAAATTCTCAGGTGCTTGGAACGGATTCTGGAGGAACACTAGAAATTGTTGAGCACAACGTTGCAGGTCGCCTTCATCCTACTGGACGTCCAGGGATTCCTGTCCTCGCGCAAAAGCTACGGTTTTTACTTGAAAACCGGCCGGCCAGGGAACGAATGGGACTGGAGGGAAGAAAGAAGGTGCAAAGGAGGTACTTGAAGAAACATATGTACAAGAGTTTCGTAGAGGTTATCGTTAGGTGCATGAGAAGCAAATAA 1359 0.4216 MTGAPLSIMELATELLSCGASVSAVVLSRKGGLLPELTRRQIKVLEDRADDSFKTAMKSDLVIAGSAACASWIGKKMIEFSNQSQKLSQYLMRKPLSSSVFPEQYIESFPAGASQVAWWIMENRREYFDRSKAVLHRVKLLVFLSELQSKQWQKWCDEENIKLRYQPALVPLSVNDELAFVAGIPSTLNTPSFSAEKMLEKRQLLRDAVRKEMGLTDNDMLVMTLSSINPSKGQLLLLESASTIVEHGRLQDSKTTKKSSDVGEGLSTLARRHHIRSLMQLLNADNRALHDISSIPLNRKVLSNNETSLEKSLRILIGSVGSKSNKVDYVKGLLTYLSQRSNLSKSVLWTPATTRVASLYSAADVYVINSQVLGTDSGGTLEIVEHNVAGRLHPTGRPGIPVLAQKLRFLLENRPARERMGLEGRKKVQRRYLKKHMYKSFVEVIVRCMRSK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0515 452 Pfam Glycosyl-transferase family 4 103 186 IPR041693 -
Lele44g0515 452 Pfam Glycosyl-transferase family 4 1 86 IPR041693 -
Lele44g0515 452 Gene3D Glycogen Phosphorylase B; 193 371 - -
Lele44g0515 452 PANTHER BNAA05G14870D PROTEIN 101 452 - -
Lele44g0515 452 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 124 445 - -
Lele44g0515 452 CDD GT4_PimA-like 336 445 - -
Lele44g0515 452 Gene3D Glycogen Phosphorylase B; 372 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0515 Lele-ChrLele44 3961532 3964636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0515 1 450 Glycosyltransferase AT3G15940 55.324 2.18e-176 509
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0388 38 3143368 3148918 Lele44g0515 44 3961532 3964636 CCT
Lele39g1015 39 18860814 18864776 Lele44g0515 44 3961532 3964636 CCT
Lele40g0367 40 3001708 3003100 Lele44g0515 44 3961532 3964636 CCT
Lele41g0841 41 18120074 18124021 Lele44g0515 44 3961532 3964636 hybridization
Lele42g0830 42 21215752 21219719 Lele44g0515 44 3961532 3964636 hybridization