Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0510 ATGGGTCTCAATTCAAACCGGGTCGAGCACTTCGATTCTCGCAACCCAACTGTTGTCAAAATCCAAACAGATATTCCTTCCGTGGAAATCCACCCGGTTCGCCTTCCTCCTGAGCAAACCACTCTCCAGAAGCTCAAGCGCAGGCTCTCTGAGATCTTCTTCCCCGATGACCCTCTTCATGGCTTCAAGAACCAAACCCGGTTCGCCAAGCTCATTATAGCTCTTCAGTATCTCTTCCCCATTTTCCAGTGGGCCCCTCACTATTCTCTCAAACTCCTCCGCTCTGATATCATCTCCGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGAATAAGCTATGCAAAGCTTGCGGATTTGCCACCGATAATCGGACTATATTCAAGTTTTGTGCCGCCACTGATATACTCTCTGCTTGGGAGTTCTAAACATCTTGGGGTTGGTCCTGTGTCCATAGCCTCTCTGGTTATGGGTTCAATGTTAAGCGAATCAGTTTCTTTCGTTTCAGATCCAATCCTGTACCTCAAACTCGCTTTCACTGCCACCTTCTTCGCTGGTGTATTCCAATCCTCTCTTGGCTTTCTCAGGTTAGGGTTTGTGATTGATTTTCTGTCAAAGGCAACACTGGTGGGTTTCATGGCAGGGGCAGCCATTATAGTGTCTCTGCAACAGCTAAAAGGCTTACTCGGAATAACTCACTTCACTTCTAAGATGCAAATGATTCCTGTTATGTCCTCTGTTTTTAATCAGAGAGATGAGTGGTCATGGCAAACAATTGTACTCGGATTCGCCTTTTTGGCTTTCCTGCTTGCAACAAGGCACATTAGCATGAAGAAACCAAAACTATTCTGGGTGTCAGCAGCTGCTCCATTGACATCAGTTATTCTGTCAACAATTCTAGTTTTTCTTCTCAGAAACAAGACTCGTGGAATTGCAATTATTGGACACCTACCAAAAGGCCTTAATCCACCATCAACGAACATGTTGGTCTTCACTGGTCCTCATTTGGCACTTGCAATCAAAACTGGCATTATCACTGGGATTCTATCTCTTACTGAAGGAATTGCAGTAGGAAGAACATTTGCAGCGCTTCAGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTGATGAATATAGCTGGCTGTTGTTCTTCATGCTATGTCACCACAGGATCGTTTTCTCGATCAGCTGTCAACTACAATGCTGGAGCACAAACAGCAGTCTCAAACATAATAATGGCTGCAGCTGTTCTTGTGACACTGCTGTTTCTCATGCCTCTGTTCTATTACACACCAAACTTCATCCTGGCAGCCATTATCATCACTGCTGTTGTAGGACTGATAGATTATCAAGCTGCATATAAACTGTGGAAAGTCGACAAGCTTGATTTCTTGGCTTGTTTGTGCTCTTTCTTTGGTGTTCTGTTCATCTCAGTGCCTCTAGGCCTTGGCATTGCGGTGTCAATTTCAGTCTTAAAGATTCTGCTTCATGTGTCTCGGCCGAACACTCTAGTGTTGGGGAACATACCAGGAACACAAATATATCACAACCTAAATAGATACAGAGAAGCTTTGAGGGTTCCTTCATTTCTCATTTTGGCTGTTGAATCTCCCATCTACTTTGCTAATTCAACATACTTGCAAGAAAGGGTACTAAGATGGGTCCGAGAAGAGGAAGAGCGCATAAAAGCAAACAATGAAAGTACATTGAAGTGCATAATTATAGACATGACAGCTGTGACAGCCATAGACACAAGTGGAATCGACACATTACGTGAACTTCGAAAGATTCTGGAAAAAAGATCATTTCAGCTTGTGTTGACAAATCCTGCAGGGACAGTGATGGAAAAGTTGCATCAGTCAAATATCTTGGATTCCTTTGGGCAGAAAGGACTCTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCTCTGTCCTGGAAAGCTGAGCCTTGA 1968 0.4431 MGLNSNRVEHFDSRNPTVVKIQTDIPSVEIHPVRLPPEQTTLQKLKRRLSEIFFPDDPLHGFKNQTRFAKLIIALQYLFPIFQWAPHYSLKLLRSDIISGLTIASLAIPQGISYAKLADLPPIIGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGSMLSESVSFVSDPILYLKLAFTATFFAGVFQSSLGFLRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGITHFTSKMQMIPVMSSVFNQRDEWSWQTIVLGFAFLAFLLATRHISMKKPKLFWVSAAAPLTSVILSTILVFLLRNKTRGIAIIGHLPKGLNPPSTNMLVFTGPHLALAIKTGIITGILSLTEGIAVGRTFAALQNYQVDGNKEMMAIGLMNIAGCCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMAAAVLVTLLFLMPLFYYTPNFILAAIIITAVVGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVSISVLKILLHVSRPNTLVLGNIPGTQIYHNLNRYREALRVPSFLILAVESPIYFANSTYLQERVLRWVREEEERIKANNESTLKCIIIDMTAVTAIDTSGIDTLRELRKILEKRSFQLVLTNPAGTVMEKLHQSNILDSFGQKGLYLTVGEAVADISLSWKAEP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0510 655 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
Lele44g0510 655 TIGRFAM sulP: sulfate permease 80 643 IPR001902 GO:0016020|GO:0055085
Lele44g0510 655 Pfam Sulfate permease family 93 472 IPR011547 GO:0016020
Lele44g0510 655 Gene3D STAS domain 504 648 IPR036513 -
Lele44g0510 655 SUPERFAMILY SpoIIaa-like 529 645 IPR036513 -
Lele44g0510 655 FunFam Sulfate transporter 31 504 650 - -
Lele44g0510 655 Pfam STAS domain 525 643 IPR002645 -
Lele44g0510 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Lele44g0510 655 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Lele44g0510 655 PANTHER SULFATE TRANSPORTER 43 646 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0510 Lele-ChrLele44 3905950 3910360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0510 1 654 Inorganic Solute Cotransporters AT3G15990 75.841 0.0 1031
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0846 41 18175023 18179842 Lele44g0510 44 3905950 3910360 hybridization
Lele42g0836 42 21269331 21273794 Lele44g0510 44 3905950 3910360 hybridization