Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0507 ATGGCTGACTTTTCTTCGGATTCCTCTTTCCATTGTGATATCCTAAGCCTTAGACACATAAGCAACTCATTTTTCCAGTTTTCTGGTTCTAAGGTGGGGTTATGTGCTAAAGGATTATCAGATTCTGAGTCTGCATGGAGCCCCACTTCGCCCCTCGATTTCAGATTCTTTTTAAATCTTAGCAGCCCATTTAGTGCTAAGTCTTCTAAACCATATTCCCAAAGTAGACAAAAGAAGCATTTTGAATGCTGTAAAATAGGCCTTGGTATCATAAATACACTTGCTGAAGAAAACAAGCTAAACAGTGAAATCCTGGAAATATCTCAAAGGAAGAATATAGTTTTTGGACCACAGGTGAAGACTGGCATTCATAAAACATCAAAGAATTGCTATGAACCATTTCCACCTTGTGTGAGATCTAATTCTTTGCCAAAGAACTATGTTATTTCTGATAAGAAAAATTCCAAATTTGAACCTGTAAGCTCCAATCATGTCCCCAGAAATAGAGAGTTCCCTCAGGAATCTGAAGCTTTCCAGAATGTTAGGATGTCTTTGCCAGTTGCCACTAAGCCTTCCTCATCATCAATAGACTCGAATCAAATTTTCAATTCAGGAATTGATGAATTTTGTTTAGAAAATTCATCTTCAGGAAAGAGTTTAGCTCCCGTAACTGGCCCAATTTCACAGTTAGATTGCCTTTCAAATATCAAACCAAGTTCCCTTCCCATATCCATTGATTTTACTAATGGATATTTTGGCACGCTTTCAGCAAGAGAGATAGAGCTTTCTGAGGATTATACTTGCATTATTTCTCATGGTCCAAACCCTAAGCGAACACATATTTTTGGTGACTGTATTTTGGAATGTCACAATACTGACTCAACCCAGTTCAGCCACAAGGAAGAACCTGAGATGAGATTCTTTAAGGTTTCTACATTATCAGAAGAATCAGCAAACCCTTATCCCTCTGACAATGTTTTGAGCTTTTGTTACTCATGCAAAAAGAAATTGGAAGAAGGGAATGATGTTTACATCTACAGGGGTGAGAAAGCATTTTGCAGTTTTGATTGTCGCTCTGAGGAGATTTTAGCTGAGGAGAAAAGCGAAAATAACTCGGCAGAGAGTTCGCCTGATTCGAGCTACCATGATGTCTTCCTCATGACTCTGCCTATGGCCAAATAA 1182 0.3849 MADFSSDSSFHCDILSLRHISNSFFQFSGSKVGLCAKGLSDSESAWSPTSPLDFRFFLNLSSPFSAKSSKPYSQSRQKKHFECCKIGLGIINTLAEENKLNSEILEISQRKNIVFGPQVKTGIHKTSKNCYEPFPPCVRSNSLPKNYVISDKKNSKFEPVSSNHVPRNREFPQESEAFQNVRMSLPVATKPSSSSIDSNQIFNSGIDEFCLENSSSGKSLAPVTGPISQLDCLSNIKPSSLPISIDFTNGYFGTLSAREIELSEDYTCIISHGPNPKRTHIFGDCILECHNTDSTQFSHKEEPEMRFFKVSTLSEESANPYPSDNVLSFCYSCKKKLEEGNDVYIYRGEKAFCSFDCRSEEILAEEKSENNSAESSPDSSYHDVFLMTLPMAK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0507 393 ProSiteProfiles Zinc finger FLZ-type profile. 325 369 IPR007650 -
Lele44g0507 393 PANTHER FCS-LIKE ZINC FINGER 11 1 391 IPR044585 -
Lele44g0507 393 Pfam zinc-finger of the FCS-type, C2-C2 317 367 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0507 Lele-ChrLele44 3894414 3896126 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g0507 44 3894414 3896126 Lele37g0442 37 3617104 3618189 CCT
Lele44g0507 44 3894414 3896126 Lele38g0409 38 3279995 3281077 CCT
Lele44g0507 44 3894414 3896126 Lele39g0986 39 18689473 18690558 CCT
Lele44g0507 44 3894414 3896126 Lele40g0387 40 3123743 3124501 CCT
Lele41g0849 41 18188471 18193423 Lele44g0507 44 3894414 3896126 hybridization
Lele42g0839 42 21285461 21287176 Lele44g0507 44 3894414 3896126 hybridization