Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0474 ATGGCATCATCTCATTTGAGCCTTCTCTGTACTCTCACTGCCATCTTGCTGGTTTCCTCCATGAATTCTTCAGTAGAATCTGCTACACAATTCAAAGTCGGTGACGCCTTCGGTTGGCAACAACCTCCCCCTAACAAGACTGCATTTTACACTCAGTGGGCTGCAACGAACAGATTCCATGTTTCAGATTCTCTGGTTTTTGAATATAAGAATGACTCAGTTGTGAGTGTGGACAAATGGGATTATTATCACTGTGACGCGAGTGATCCAATCACTATCTTCAACAATGGGAACAGCACTATCAATCTGGAGCAGCCTGGTTCATTCTACTTCATCAGTGGGATTTATGAACATTGCATGAATGGCCAGAAATTGATGCTTCAAGTCATTTCTCCAATGTCTGCTTCTGCTCCTTCACCTTCTTCTCATCTTCATCATCATAGCTCTGCGTCTTCATCATCATCATCATCGCTTTCAGTGGCTTTCATCACCACTTGTTTTTCCTTCTTCTTGTTCATTAATGCTTTAGGCGTCTCTTCTGTCTAG 546 0.4267 MASSHLSLLCTLTAILLVSSMNSSVESATQFKVGDAFGWQQPPPNKTAFYTQWAATNRFHVSDSLVFEYKNDSVVSVDKWDYYHCDASDPITIFNNGNSTINLEQPGSFYFISGIYEHCMNGQKLMLQVISPMSASAPSPSSHLHHHSSASSSSSSSLSVAFITTCFSFFLFINALGVSSV 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0474 181 SUPERFAMILY Cupredoxins 28 130 IPR008972 -
Lele44g0474 181 Gene3D - 27 134 IPR008972 -
Lele44g0474 181 FunFam Early nodulin-like protein 1 28 134 - -
Lele44g0474 181 Pfam Plastocyanin-like domain 47 123 IPR003245 GO:0009055
Lele44g0474 181 ProSiteProfiles Phytocyanin domain profile. 29 131 IPR003245 GO:0009055
Lele44g0474 181 PANTHER BLUE COPPER PROTEIN 27 145 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0474 Lele-ChrLele44 3632629 3633277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0474 10 159 Phytocyanin Superfamily AT1G79800 45.752 1.75e-47 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0897 41 18508118 18508909 Lele44g0474 44 3632629 3633277 hybridization
Lele42g0882 42 21575861 21576506 Lele44g0474 44 3632629 3633277 hybridization