Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0472 ATGTTAATGGAACTACCGGAGTGTTTTGTCGGTGGCTATTTCTCTGCCGGAGGAGATCAATTATCGTCGGACAAGCGCCATGGTGCTGACCAGAAGCCTGGTGAGCCCTTCGCCATTGACGACCTCCTTGACTTTTCCAACGCCGACGCTATGATCATGTCCGACGGTTTCTTCGATAATGCCGCCGGCAACTCCACTGATTCATCCACTTTCACCGCCGTTGACAGCTGTAATTCATCCGTTTCCGGCGGTGACAATCATTCCTCCTCCGGTTACGCTGGCTCCCGCGGCTTCGGCGATCCTCAATTATCTGGAGAACTCTGCGTCCCGTATGACGACTTGGCTGAACTGGAATGGCTATCGAACTTCGTGGAAGACTCATTTTCGGTCGAAGATGAGCTAAGCACACTCCACCTCCTCTCCGGAACCACCGCTTCCGGCATCGGCACGAAACCTCAGACACCAGAGTCCTCCTCTTCCTCCGAAACACTTCCACCCTTCGCTGCCGACACGGGTCGAAACGCACCGATCTTCCATCCAGAAACTCCGCTTCCAGGTAAAGCTCGGAGCAAGCGTACACGTGCTGCCCCCGGGGATTGGTCTACGCGCCTCCTTCACCTGATCACCCCTACGGGCGTTTCGGAACCGACGCAAGCGAAGCCTGTGATGGCAAAGAAAAGAGAGAGTTCGAATTCGGAGTACTCTTCGGATCGGAAATGCCTGCATTGCGCATCCGAGAAGACTCCGCAATGGCGGACAGGACCAATGGGTCCAAAGACGCTGTGCAATGCTTGTGGAGTGAGGTACAAGTCAGGGAGGCTGGTGCCGGAGTACCGACCGGCCGCGAGCCCTACTTTTATATCGTCAAAGCACTCCAATTCGCACAGGAAGGTGATGGAGATGAGGAGGCAGAAGGAACTGCAGAGGCAGCATCAATTGGTTAGCCAGAGCTCAATTTTCAGCGTTTCTCATGGCGGAGATGAGTTCTTGATCCCTCAACCCAGCGGTCCAGATTACAGGCACATGATCTAG 1032 0.5475 MLMELPECFVGGYFSAGGDQLSSDKRHGADQKPGEPFAIDDLLDFSNADAMIMSDGFFDNAAGNSTDSSTFTAVDSCNSSVSGGDNHSSSGYAGSRGFGDPQLSGELCVPYDDLAELEWLSNFVEDSFSVEDELSTLHLLSGTTASGIGTKPQTPESSSSSETLPPFAADTGRNAPIFHPETPLPGKARSKRTRAAPGDWSTRLLHLITPTGVSEPTQAKPVMAKKRESSNSEYSSDRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFISSKHSNSHRKVMEMRRQKELQRQHQLVSQSSIFSVSHGGDEFLIPQPSGPDYRHMI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0472 343 ProSitePatterns GATA-type zinc finger domain. 240 265 IPR000679 GO:0006355|GO:0043565
Lele44g0472 343 PANTHER GATA TRANSCRIPTION FACTOR 31 309 - -
Lele44g0472 343 CDD ZnF_GATA 239 290 IPR000679 GO:0006355|GO:0043565
Lele44g0472 343 Pfam GATA zinc finger 240 273 IPR000679 GO:0006355|GO:0043565
Lele44g0472 343 FunFam GATA transcription factor 229 316 - -
Lele44g0472 343 MobiDBLite consensus disorder prediction 213 233 - -
Lele44g0472 343 MobiDBLite consensus disorder prediction 143 167 - -
Lele44g0472 343 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 236 298 - -
Lele44g0472 343 ProSiteProfiles GATA-type zinc finger domain profile. 234 270 IPR000679 GO:0006355|GO:0043565
Lele44g0472 343 MobiDBLite consensus disorder prediction 143 196 - -
Lele44g0472 343 Gene3D - 235 317 IPR013088 GO:0006355|GO:0008270
Lele44g0472 343 PIRSF Txn_fac_GATA_plant 22 324 IPR016679 GO:0003677|GO:0005634|GO:0045893
Lele44g0472 343 SMART GATA_3 234 284 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0472 Lele-ChrLele44 3617844 3619028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0472 37 343 C2C2-Gata Transcription Factor Family AT4G32890 45.988 8.91e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lele44g0472 GATA 3.1e-14 CL0167