Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0469 ATGCCGGTGCTGCGTAGTGGAGTGCGCAGAGGCCGAGCAGCAGCGAAGCAACAGCAAGAGAAGAAGCAGCCTAATCCGATCGAAGAAAGAGAAGCGATTGCGACGAGGACTAGGAGGAGAAGAGCGGCGGCGGCGGTAGGGCCGAAGAATAAAAAGCAACGGAAACAGCAACAGAAGCAGGTGGTGGTGGATGTGGACAATGACAACGTAGTTGTGCCGGCCAAGGAGGAGGAGGCGAAAAGGGGTTTGGACGAAGCTCTTGTTCGTGTTGGCACCACAGGTGGTGGGGCCAGTGGTGGCGTGGTTGGCGATTGTGGAGAGGAGAAGGAAGAAATAAGGGAGAAGAAAATGGGTGATCATGATAGTGGAGCTCGGAGCAAGGATAAGGCCAATGTTGGTGAAGATGAGGGGAATACCGCCCCTGTTCCTAAGAAGGTTCAAGTGGGCGGTTCCCCTTGTTATAAAGTAGAAAAAAAACTGGGGAAGGGTGGATTTGGACAAGTATATGTTGGTCGCCGTTTTAATGTTGTAAATATGAACGAGAGAACTGGACCTGGAGCTGTGGAGGTTGCATTGAAATTTGAGCATAGAAGTAGTAAAGGATGTAACTATGGACCACCACACGAGTGGCAAGTGTACAACACTCTAGGTGGCAGCCATGGTGTGCCACGAGTACACTACAAGGGTAGGCAAGGTGACTATTATATCATGGTTATGGATATGCTGGGGCCTAGCTTATGGGATGTGTGGAATAACAGCTCTTATTCAATGTCCACTGAAATGGTTGCATGTATTGCCATTGAAGCAATATCCATATTGGAGAAGATGCACTCTCGAGGGTATGTGCATGGGGACGTGAAGCCTGAAAATTTTCTGCTTGGTTCTCCTGGGACCCCAGATGAGAAGAGATTGTTTCTCGTTGATCTTGGATTAGCATCTAGATGGCGGGATAATTCAACAGGTTCACATGTGGAATATGACCAAAGGCCAGATGTTTTTAGGGGCACAGTCCGCTATGCTAGTGTGCATGCACATTTAGGGCGAACTGCCAGCAGGAGGGATGATCTGGAATCCCTTGCTTATACATTGATTTTCCTTCTTCGAGGCCGTCTCCCTTGGCAGGGGTACCAGGGAGAAAACAAAGGGTTTTTTGTTTGCAAGAAGAAGATGGGAACAACTCCAGAGTGCCTATGTTGCTTCTGCCCCCAGCCTTTTAGGCTTTTTGTTGAACATGTAGTAAATCTGAAGTTTGACGAAGATCCTAACTACACAAAATATATTTCTCTGTTTGATGGGATCGTTGGTCCAAACCCAGACATTAGACCAATTAATACAGAAGGTGCACAAAAGCTCACTGGTCATAAGAGAGGTCGGTTGGCCATGGAAGAAGAGGACGATGAACAACCAAAAAAGAAGTTCCGAATGGGTCTACCAGCAACACAGTGGATAAGCATATATAATGCTCGCAGACCAATGAAACAAAGATACCACTACAATGTGTCAGATGGAAGGCTTGCACAGCACATCGAAAAGGGAAATGAGGATGGCTTATATATAAGCAGTGTGGCTTCATGTTCGAACCTGTGGGCAATAATCATGGATGCAGGCACTGGTTTCTCCGACCAAGTTTATGAACTCTCTCCTCACTTTCTCCACAAGGAATGGATAATGGAGCAGTGGGAAAAAAGTTACTATATCAGTGCAGTTGCTGGAGCTACAAACGGGAGCTCATTAGTAGTCATGTCAAAGGGCACATCATTTGTACAGCAATCTTACAAAGTTAGCGAGCCATTTCCTTTCAAATGGATTAACAAAAAATGGAGGGAAGGCTTCTATGTTACTGCAATGGCTACCTCAGGGGTCAGATGGGGAGTAGTTATGTCACGCGGTGCTGGATTTTGCGAACAGGTGGTTGAACTGGATTTTCTTTATCCCAGCGAAGGGATTCATAAGCGCTGGGATCATGGATACCGCATAACAGCAACTGCCGCAACTTGGGACCAGGCCGCTTTTGTGCTCAGTGTGCCGAGGAGGAAGCCTGCAGATGAAACACAGGAAACCCTGAGGACAACTGTTTTTCCTAGTACGCATGTCAAGGAGAAATGGGCAAAGAACCTTTATATCGCATCAGTTTGCTATGGGCGAACTGTTTCTTGA 2157 0.4706 MPVLRSGVRRGRAAAKQQQEKKQPNPIEEREAIATRTRRRRAAAAVGPKNKKQRKQQQKQVVVDVDNDNVVVPAKEEEAKRGLDEALVRVGTTGGGASGGVVGDCGEEKEEIREKKMGDHDSGARSKDKANVGEDEGNTAPVPKKVQVGGSPCYKVEKKLGKGGFGQVYVGRRFNVVNMNERTGPGAVEVALKFEHRSSKGCNYGPPHEWQVYNTLGGSHGVPRVHYKGRQGDYYIMVMDMLGPSLWDVWNNSSYSMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGSPGTPDEKRLFLVDLGLASRWRDNSTGSHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFFVCKKKMGTTPECLCCFCPQPFRLFVEHVVNLKFDEDPNYTKYISLFDGIVGPNPDIRPINTEGAQKLTGHKRGRLAMEEEDDEQPKKKFRMGLPATQWISIYNARRPMKQRYHYNVSDGRLAQHIEKGNEDGLYISSVASCSNLWAIIMDAGTGFSDQVYELSPHFLHKEWIMEQWEKSYYISAVAGATNGSSLVVMSKGTSFVQQSYKVSEPFPFKWINKKWREGFYVTAMATSGVRWGVVMSRGAGFCEQVVELDFLYPSEGIHKRWDHGYRITATAATWDQAAFVLSVPRRKPADETQETLRTTVFPSTHVKEKWAKNLYIASVCYGRTVS 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0469 718 ProSiteProfiles Protein kinase domain profile. 154 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0469 718 FunFam casein kinase 1-like protein HD16 127 474 - -
Lele44g0469 718 MobiDBLite consensus disorder prediction 1 69 - -
Lele44g0469 718 Pfam Protein kinase domain 154 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0469 718 PANTHER CASEIN KINASE-RELATED 148 683 - -
Lele44g0469 718 MobiDBLite consensus disorder prediction 14 38 - -
Lele44g0469 718 SUPERFAMILY Protein kinase-like (PK-like) 154 434 IPR011009 -
Lele44g0469 718 MobiDBLite consensus disorder prediction 91 144 - -
Lele44g0469 718 MobiDBLite consensus disorder prediction 104 134 - -
Lele44g0469 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Lele44g0469 718 SMART serkin_6 154 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0469 718 Gene3D Transferase(Phosphotransferase) domain 1 119 475 - -
Lele44g0469 718 MobiDBLite consensus disorder prediction 42 56 - -
Lele44g0469 718 CDD STKc_CK1 154 430 - -
Lele44g0469 718 ProSitePatterns Protein kinases ATP-binding region signature. 160 193 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0469 Lele-ChrLele44 3573241 3577921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0469 117 379 AGC Kinase Gene Family AT3G08730 23.019 1.22e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lele44g0469 Pkinase 1.9e-16 CL0016