Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0463 ATGACGCGGCGGTGCTCTCACTGCAGCAATAACGGGCACAACTCCCGAACTTGCCCGTCACGTGGTGGAGGTGCCGGCGGCGGAAGCACTGGAGGTGTGAAACTATTCGGTGTTAGACTAACCGATGGATCAATCATTAAAAAGAGCGCGAGCATGGGGAATCTCTCTGCCCATTACTATTCTTCTTCTTCAGCGGCTGGATCACCGAATCCCGGGTCGCCGTGCTCTGACCCGCTCCGAGACCTGGTTCATGAGCAAGACGGGTGCTTGTCCGACGATCCCTCTCATGCCTCTAACTCCGCGAACCGTCGTGGGGAAAGAAAGAAAGGTGTTCCATGGACTGAAGAAGAACATAAGATGTTTTTAATTGGTCTCCAGAAGCTGGGTAAAGGTGATTGGCGAGGCATATCTCGCAATTTTGTTGTGTCAAGGACTCCTACTCAAGTAGCAAGTCATGCCCAAAAGTACTTTATCCGGCAGAGCAATGCTACCCGGAGAAGAAGGCGTGCCAGTCTTTTTGACATGGTTCCAGATGTGGCTTCAGATCCACCTTCGGTGCCAGAAGATCAAGTATTATTGCCACCTTCTGAGAACTCACAGCCTGGTAGTGCAAATTTACAACCATCATTAGATCTCTCCCTCAAGTCAGAATTTGAACCCATGGAAACTAATTGTGATGAAAATGTGGAAGAGCCGTATGAAACTATGGTAAGATCGAGTGGACTGACACCAGTGGCTAACGGATTCATGCCAACGTACGTACCTGTTGCATTTTCCTTATGGCCATCAAATGCAGCCCCCTTTGAAGAAGTTAAGGAAGCTGAAAAAGCTTATCATCAGGTGCTTAAGCCAATCCCAGTAGTTCCTAAGGAACCAGTCAATGTTGATGACCTTGTTGGCATGTCTCAACTGAGTTTGGGGGAAACGCGAAAAGGTGATAGAGAGCCTTCCCCACTTTCTTTGAAGTTGCTGAGGGAGCCCTCAAGGCAATCAGCATTCCATGCAAATGCTCCAGTTGGTGGTTCAGATTTAAACAATGGCAAGAACAGTGCAATTCAAGCAGCTTAA 1068 0.4841 MTRRCSHCSNNGHNSRTCPSRGGGAGGGSTGGVKLFGVRLTDGSIIKKSASMGNLSAHYYSSSSAAGSPNPGSPCSDPLRDLVHEQDGCLSDDPSHASNSANRRGERKKGVPWTEEEHKMFLIGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNATRRRRRASLFDMVPDVASDPPSVPEDQVLLPPSENSQPGSANLQPSLDLSLKSEFEPMETNCDENVEEPYETMVRSSGLTPVANGFMPTYVPVAFSLWPSNAAPFEEVKEAEKAYHQVLKPIPVVPKEPVNVDDLVGMSQLSLGETRKGDREPSPLSLKLLREPSRQSAFHANAPVGGSDLNNGKNSAIQAA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0463 355 MobiDBLite consensus disorder prediction 323 355 - -
Lele44g0463 355 MobiDBLite consensus disorder prediction 192 208 - -
Lele44g0463 355 MobiDBLite consensus disorder prediction 177 208 - -
Lele44g0463 355 MobiDBLite consensus disorder prediction 1 18 - -
Lele44g0463 355 Gene3D - 113 162 - -
Lele44g0463 355 FunFam transcription factor MYB1R1 111 162 - -
Lele44g0463 355 PANTHER TRANSCRIPTION FACTOR KUA1 3 272 - -
Lele44g0463 355 SMART sant 109 159 IPR001005 -
Lele44g0463 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 161 IPR017930 -
Lele44g0463 355 MobiDBLite consensus disorder prediction 1 29 - -
Lele44g0463 355 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 108 160 IPR006447 GO:0003677
Lele44g0463 355 MobiDBLite consensus disorder prediction 60 112 - -
Lele44g0463 355 SUPERFAMILY Homeodomain-like 107 162 IPR009057 -
Lele44g0463 355 ProSiteProfiles Myb-like domain profile. 105 157 IPR001005 -
Lele44g0463 355 Pfam Myb-like DNA-binding domain 112 157 IPR001005 -
Lele44g0463 355 CDD SANT 112 157 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0463 Lele-ChrLele44 3502230 3505648 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele44g0463 Myb_DNA-binding 1.8e-10 CL0123