Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0460 ATGAATGGTAGGTCGAGAAACGAGGAGGTATCTCCTCAGCTGCTGGATTTGATCCCAACAGAACGAGAGTGGCATGAAAACAGAGATGAAGAAAGAATCCACCACAACAAGTCTTCAGAAGAGAGGAAACTTGAGCTTAGACTTGGTCCACCTGGTGAAGAATACGAATCTCTACTCTCTCTTGGTTACTTCTCAGCCTCCCACGCCCAGAAAACTGTGTCTTCTTCTCCTTGGGCTTCTTCTTCAGGCTACCAGGACATTAATCAACGCAAGGGGGTTTCATCGTCATCATTCCTACAACAGCCTCATCCCTCTTCTGCAAATACAGCTGTACCCAACAGCTCTCAGAAAAGAACTGCTCCTGGTCCGGTAGTGGGTTGGCCTCCAATTCGTTCATTTAGGAAGAACCTTTCAAGCAGTAGCTCTTCTAAGGTTGTTCGTCAACATGAATCTCAGAATCAGCATCATGTGGTTGAATATAAGGTTGCTGGGAAGAAACCTGTGGCTGACAACAACGTTGTTGGTACTGGTAAAGGCATGTTTGTGAAGATCAACATGGATGGAGTTCCCATAGGCAGAAAAGTAGATCTTAATGCTTACGATGGCTATGAAAAACTCTCATCTGCTGTTGATGAACTCTTTAGAGGCCTCCTTGCTGCTCAAAGAGATTCCTCTGGTGGTGCTGGTGGGAGTCAGAACAAACCAGTGGAAGAAAAAGCCATTACAGGTTTATTGGATGGAAGTGGAGAATACACTCTGGTTTATGAGGATAATGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACTTGTTTGAGTTTCCATCTGTAAATTCTGTGAATAGGTCTTGTTTTGATATGCTCATGATTGGAGTTTTATCTGAACCACCTTTCACATATTAG 906 0.4437 MNGRSRNEEVSPQLLDLIPTEREWHENRDEERIHHNKSSEERKLELRLGPPGEEYESLLSLGYFSASHAQKTVSSSPWASSSGYQDINQRKGVSSSSFLQQPHPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLSSSSSSKVVRQHESQNQHHVVEYKVAGKKPVADNNVVGTGKGMFVKINMDGVPIGRKVDLNAYDGYEKLSSAVDELFRGLLAAQRDSSGGAGGSQNKPVEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHLFEFPSVNSVNRSCFDMLMIGVLSEPPFTY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0460 301 MobiDBLite consensus disorder prediction 19 47 - -
Lele44g0460 301 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 41 277 IPR003311 GO:0005634|GO:0006355
Lele44g0460 301 Pfam AUX/IAA family 44 273 IPR033389 -
Lele44g0460 301 MobiDBLite consensus disorder prediction 74 120 - -
Lele44g0460 301 ProSiteProfiles PB1 domain profile. 179 288 IPR000270 GO:0005515
Lele44g0460 301 Gene3D - 174 284 - -
Lele44g0460 301 MobiDBLite consensus disorder prediction 74 129 - -
Lele44g0460 301 FunFam Auxin-responsive protein 175 285 - -
Lele44g0460 301 SUPERFAMILY CAD & PB1 domains 177 273 - -
Lele44g0460 301 MobiDBLite consensus disorder prediction 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0460 Lele-ChrLele44 3460585 3463886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0460 182 273 B3 DNA Binding Superfamily AT4G23980 35.870 2.71e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele44g0460 AUX_IAA 3.8e-58 CL0072