Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0453 ATGAAGAGCACGCCACTGTGGATTCAAGCTTGCTTTGTGTTTGTTTCATTCATCTTTGTTACCCACTCAGTACAAGTTTTTGCAGATGACTCTTATGACAGTGATTCGGAGGAGGTGATAAGCATCGACTACTCTGTTTTCATCAGATACCGTGATGATATCTACGGGAGGTCCTGGTTCAATAATAAAGCCACTGACAACTCAATGCCAATCAATACATCACCAGAAGCTATTGAGGATGATGATTCCAATGATGAGTTCAAACTACCAAAGCAAGTGTTGAGCACTGCAATCCAATCATCACTAAATTCTTCCTCTTCCTTGAATATCGATTGGGACTATAGTACGGGTTATGAATATTATGTTTACCTTCATTTTTATGACTTCGTGGAGCATTCTCAAAAGCAGAAAAGAAGTATGGAAATTGCTTTCACTGATACAATCCTCCGAGAATCTGTAACTCTTGAATACCGGCAACTCCAAACCAAGTTTTATACAATTCCAGAAGGAGTATCTCCTACTAATATTACGATGACATCCTCGCCAGGTTCTGGTTTGCCTCCCATGATCAATGCTTATGAGATCTATAGAGTACTAAGAGAACCCAATTTACCAACTCATAACGATGATGTTGTTGCTATGAGGAGCATCAAGCACGGTTATAATATCCAGAGAATCAGTTGGCAAGGAGATCCCTGCATGCCAAAAGATTACGTATGGGAAGGTGTAACTTGCAATTACTATGAGAACTTTCCAAGGGTCATTTCATTGAAGATGAGCTCAAGCAAATTAGAAGGAGAGATGGTTACTGATTTCTCCAAACTTGAGATGTTGGAGTCCTTGGATTTATCAAACAATCAACTGACTGGAGAAATACCAGAATCTTTAGCTAAACTAGCCAATTTGAAAGTACTTAATTTGACAGGAAATAATCTCATAGGTTCAGTTCCTGAGGCTGTGACTCTTAAGGAGAAATCTGGTTTGACATTGAGTTTGGATGGAAATCCAGATCTATGTCAAAACTCAGGCTCTTGCAAAACCAAAAAGTTCATCGGACCACTTGTTGCCTCATCATTAGCTTCTATGGCAGTACTTGTAATAATACTTTACATTCCTATGATGCTCTACAAACGTAAAAGAAAACAGCAAAAAAATGGTACGGAAGCTCCCCAAGTGATGCTGTGTAAGAAAGGTGGTGATCTTAAATCAAAATATCAAGAATTTTGTAAGGATGAAGTTCTTAGTATTACCAATAATCTTGAATCAGTAATTGGAGAAGGAGGATTTGGAAAAGTGTATCTAGGAAAATTACAAGATGGGACACAAGTTGCAGTAAAATTACTTTCTAAGTCATCAAAACAAGGATATGATGAGTTTGAATCAGAGGTAAAACTATTATCCGTGGTTTATCATAAAAACTTACTCTCTCTTGTTGGTTACTGTGACGATGGTGACATGAGAGCATTGATTTATGAATACATGGCAAAGGGAAATCTCCATCACCAATTATCAGGTAAAAACTCTCACGTTTTAAATTGGAATGAGAGACTTCAAATCGCATTAGATGCAGCGTGTGGATTGAACTATTTACATAATGGGTGCAACCCGCCAATAATCCATAGAGATCTAAAATCATCTAACATCTTGCTAAGTGAAAATATGCATGCCAAGATTGCTGATTTCGGACTATGTAAAGCTTTTGCAAGTGACACTGACACCCATATTTCAACTCGTCCCGCTGGCACATTTGGTTACCTCGACCCTGAATTTTATAGATCTGGAAACTTGCACAAATACAGTGATGTCTATAGTTTTGGGATAATTCTCCTCGAGCTGATGGCGGGTCGATCGGCAATTATGAGAACACCTGAAGGCGCAAGTCATATCGTTGATTGGATCACTCCAAAGTTTGATATGGGAGATATAGAATCCATTATGGATCCAAAATTAGAGGGAAACTTCAACATTGCAACAGCAAGAAAGGTTTTGGAGATAGCCATGTGTTGCATTAAACCAGTTGGTGCGAAAAGACCAGATATAAGCAATGTCGAGAATGATCTAAAGCAGTGTTTGGCGCTGGACACGTTGTTCATTGAAAGTGCAGAAAGCAGCGGTTTATTCTCAAGCACCACATTTGATTCAAGTTTTTATCATTGTGGATCACACTCACCACCATCTGTTAGATAA 2187 0.3859 MKSTPLWIQACFVFVSFIFVTHSVQVFADDSYDSDSEEVISIDYSVFIRYRDDIYGRSWFNNKATDNSMPINTSPEAIEDDDSNDEFKLPKQVLSTAIQSSLNSSSSLNIDWDYSTGYEYYVYLHFYDFVEHSQKQKRSMEIAFTDTILRESVTLEYRQLQTKFYTIPEGVSPTNITMTSSPGSGLPPMINAYEIYRVLREPNLPTHNDDVVAMRSIKHGYNIQRISWQGDPCMPKDYVWEGVTCNYYENFPRVISLKMSSSKLEGEMVTDFSKLEMLESLDLSNNQLTGEIPESLAKLANLKVLNLTGNNLIGSVPEAVTLKEKSGLTLSLDGNPDLCQNSGSCKTKKFIGPLVASSLASMAVLVIILYIPMMLYKRKRKQQKNGTEAPQVMLCKKGGDLKSKYQEFCKDEVLSITNNLESVIGEGGFGKVYLGKLQDGTQVAVKLLSKSSKQGYDEFESEVKLLSVVYHKNLLSLVGYCDDGDMRALIYEYMAKGNLHHQLSGKNSHVLNWNERLQIALDAACGLNYLHNGCNPPIIHRDLKSSNILLSENMHAKIADFGLCKAFASDTDTHISTRPAGTFGYLDPEFYRSGNLHKYSDVYSFGIILLELMAGRSAIMRTPEGASHIVDWITPKFDMGDIESIMDPKLEGNFNIATARKVLEIAMCCIKPVGAKRPDISNVENDLKQCLALDTLFIESAESSGLFSSTTFDSSFYHCGSHSPPSVR 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0453 728 Pfam Leucine Rich repeats (2 copies) 277 317 IPR025875 -
Lele44g0453 728 ProSitePatterns Protein kinases ATP-binding region signature. 424 446 IPR017441 GO:0005524
Lele44g0453 728 FunFam receptor-like protein kinase FERONIA 380 493 - -
Lele44g0453 728 SUPERFAMILY L domain-like 236 320 - -
Lele44g0453 728 ProSiteProfiles Protein kinase domain profile. 418 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0453 728 PANTHER OS07G0107800 PROTEIN-RELATED 24 696 - -
Lele44g0453 728 SMART serkin_6 418 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0453 728 Gene3D Ribonuclease Inhibitor 213 340 IPR032675 -
Lele44g0453 728 ProSiteProfiles Leucine-rich repeat profile. 277 300 IPR001611 GO:0005515
Lele44g0453 728 Gene3D Transferase(Phosphotransferase) domain 1 495 701 - -
Lele44g0453 728 PRINTS Leucine-rich repeat signature 299 312 - -
Lele44g0453 728 PRINTS Leucine-rich repeat signature 278 291 - -
Lele44g0453 728 SUPERFAMILY Protein kinase-like (PK-like) 407 687 IPR011009 -
Lele44g0453 728 CDD STKc_IRAK 424 689 - -
Lele44g0453 728 Gene3D Phosphorylase Kinase; domain 1 424 494 - -
Lele44g0453 728 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 494 697 - -
Lele44g0453 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Lele44g0453 728 Pfam Protein tyrosine and serine/threonine kinase 420 684 IPR001245 GO:0004672|GO:0006468
Lele44g0453 728 FunFam Leucine-rich repeat receptor-like kinase 209 341 - -
Lele44g0453 728 Pfam Malectin-like domain 47 198 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0453 Lele-ChrLele44 3402694 3409654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0453 48 691 Receptor kinase-like Gene Family AT2G28970 42.618 9.69e-172 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele44g0453 PK_Tyr_Ser-Thr 8.3e-47 CL0016