Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0452 ATGGCACCACTTTGGGTTCTGGCTTTGCTTGTATCTGTTTCTTCTATCATCGATATTCCAAAGTCAGCCCAAGTTGTTGCAGCTGATGATGACCCTGATGCAGACAATAAGCCCTTAGATTTATTCATTATCTTAAATAAAAAAGTCAAGGATTTTCTCAAGCTGAAGTTCATGGTATTACCAATTGACTTTGAAACTCAAATTGGAGGAGGGGGATTTAGAAAAGTGTACCTTGGAAGACTAAAAGATGGTACACAAGTTGCAGTCAAGTTACTTTCTCAGTCATCACAGCGAGGGTTTAATGAGTTTCTATCAGAGGCAAAACTATTATCCATTATGTATCATAGAAATCTTGTTTCTCTTGTTGGCTATTGTGATGATGGAGACACGAAAGCGCTGATCTATGAATACATGGCAAAGGGAAATCTCCATCACCTACTGTTAGATAAGAACCCAAATATTTTGAAGTGGAATGAGAGACTTCAAATTGAATTGGATACAGCATGCGCAAGAACGCCTGAAGGCACATGTCACATATCTGATTGGGTCAAACCAAAGCTTGAGAATGGGGATATCCAAGCCATTGTGGATCCAAGATTAGAAGGAAAATTCAGTAGTTCAGTATGGAAGTTTCTAGAGATAGCCATGTCATGA 654 0.3884 MAPLWVLALLVSVSSIIDIPKSAQVVAADDDPDADNKPLDLFIILNKKVKDFLKLKFMVLPIDFETQIGGGGFRKVYLGRLKDGTQVAVKLLSQSSQRGFNEFLSEAKLLSIMYHRNLVSLVGYCDDGDTKALIYEYMAKGNLHHLLLDKNPNILKWNERLQIELDTACARTPEGTCHISDWVKPKLENGDIQAIVDPRLEGKFSSSVWKFLEIAMS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0452 217 SUPERFAMILY Protein kinase-like (PK-like) 61 170 IPR011009 -
Lele44g0452 217 SMART tyrkin_6 62 216 IPR020635 GO:0004713|GO:0006468
Lele44g0452 217 Pfam Protein tyrosine and serine/threonine kinase 63 170 IPR001245 GO:0004672|GO:0006468
Lele44g0452 217 Gene3D Transferase(Phosphotransferase) domain 1 43 170 - -
Lele44g0452 217 ProSiteProfiles Protein kinase domain profile. 62 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0452 217 PANTHER OS07G0107800 PROTEIN-RELATED 57 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0452 Lele-ChrLele44 3397613 3401120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0452 63 205 Receptor kinase-like Gene Family AT2G19230 43.151 1.33e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele44g0452 PK_Tyr_Ser-Thr 3.2e-18 CL0016