Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0451 ATGACTTCTTCGTTTAAAAAAGACGGGAATCTAAAAGCAAAAAATCGTGCGTTTGATCACTTAGAAGTTCTGAGTATTACCAACAACTTTGAAACGGTAATTGGACAAGGGGGATTTGGAAAAGTGTACCTTGGTACACTACAAGATGATACCCAAGTTGCAGTCAAGTTACTCTCAAAGTCATCACAACAAGGGTTTAAGGAATTTCAGTCAGAGGCAGAACTTTTGATGGTTGTTCATCATAGGGACTTGGTTTCTCTTGTTGGTTATTGTAACGATGGTGACATGAAAGCACTAGTTTATGAATACATGACTGAAGGAAATCTCCGACAAAAATTATCAGATAAGAACCCATGTGCTTTGAAATGGAATGAGAGACTTCAGATAGCATTGGATGCAGCATGTGCGTTTTTCGATGACACCAACACTCAGTTTTCGACTCGTCCTGCTGGCACAATAGGTTACATTGATCCTGAAGTCAATACCTCTGGGAACTTGAATAAGAAAAGCGATGTTTATAGTTTTGGGATAATTTTACTCGAGCTTATGACTGGCCGGCCGGCAGTAATAGGACCACATGGCAACAGAAATCACATATCAGATTGGGTGGCTCCGAAGCTGGAGAGTGGGGACATTAAATCCATTATGGATCCGAGATTAGAGGGAGAATTCCATAGTGCTTCAGCATGGAAATTATTAGAGATAGCCATATCTTGCATTCCACCAGTTGCAATTCAAAGGCCTGATATAGGTCTTGTAGTAGCTGATTTAAAGGAATGTTTGGCCTTGGAAATATCCCTTCAAAGTGCAGAAAGAAACAGTGCAATTTCTAGCTCTCCATTGAGCATCACTTATCCACTTGAATCCAACTCAGCTCCATGCTCTAGATCATCTTCATCATTAAGTGTTGTGGTCACAGGATTTGGGCGAAGATGGAGGTCCGATGAGGAGCCTAAAGCTAGAAACAATGCAAAGAGCCAGAGGTTAAGGCAGAAAGGTGTGGAATTGCATGGAGTGGCAGAGGATAAACAGTGA 1035 0.4135 MTSSFKKDGNLKAKNRAFDHLEVLSITNNFETVIGQGGFGKVYLGTLQDDTQVAVKLLSKSSQQGFKEFQSEAELLMVVHHRDLVSLVGYCNDGDMKALVYEYMTEGNLRQKLSDKNPCALKWNERLQIALDAACAFFDDTNTQFSTRPAGTIGYIDPEVNTSGNLNKKSDVYSFGIILLELMTGRPAVIGPHGNRNHISDWVAPKLESGDIKSIMDPRLEGEFHSASAWKLLEIAISCIPPVAIQRPDIGLVVADLKECLALEISLQSAERNSAISSSPLSITYPLESNSAPCSRSSSSLSVVVTGFGRRWRSDEEPKARNNAKSQRLRQKGVELHGVAEDKQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0451 344 ProSitePatterns Protein kinases ATP-binding region signature. 34 56 IPR017441 GO:0005524
Lele44g0451 344 Gene3D Transferase(Phosphotransferase) domain 1 9 136 - -
Lele44g0451 344 SUPERFAMILY Protein kinase-like (PK-like) 15 277 IPR011009 -
Lele44g0451 344 MobiDBLite consensus disorder prediction 312 344 - -
Lele44g0451 344 PANTHER OS07G0107800 PROTEIN-RELATED 13 268 - -
Lele44g0451 344 Gene3D Transferase(Phosphotransferase) domain 1 137 278 - -
Lele44g0451 344 FunFam Leucine-rich repeat receptor-like protein kinase 6 103 - -
Lele44g0451 344 ProSiteProfiles Protein kinase domain profile. 28 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0451 344 Pfam Protein tyrosine and serine/threonine kinase 146 186 IPR001245 GO:0004672|GO:0006468
Lele44g0451 344 Pfam Protein tyrosine and serine/threonine kinase 30 136 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0451 Lele-ChrLele44 3392889 3395535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0451 13 279 Receptor kinase-like Gene Family AT1G51890 44.156 2.25e-79 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele44g0451 PK_Tyr_Ser-Thr 1.9e-05 CL0016