Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0435 ATGGCTGGGATCATTGTAGTTTTCGACTTCGACCTCACGATTCTCGACTGCGACAGCGACTATTGGGTCGTCGATGAATTCTCTGCAACAGACTTATTCAATCAGCTTCTTCCTACCATGCCTTTGAACTCTCTCATGGATAGGATGTTGACGGAGATTCATGCACGAGGGAAAACCATTGAAGACATTGCTCAAGTTCTGAAGAGGGTTCCATTGCATCCCAGAATAGTACCTGCGATTAAAGCAGCTCACGCGTTGGGGTGTGATTTGAGGATTGTGAGTGATGCAAACGTGTTCTTCATTGATACGATATTGGAAAACCTGGAAATAAAGCAATGTTTCACAGATATTGACACAAACCCAGGCTTCGTTGACGGTGAAGGAAGGTTGAAAGTTTTGCCTTATCATGACTTCACTAAATCTCCCCATGGCTGTAGTCTTTGTCCCCTCAACATGTGCAAGGGTAAAATCATAGAGAGGATTCGGAATTCAGTACTAGAGAAGAGGATGATATATGTGGGAGATGGGAGTGGGGATTACTGCCCAAGTTTGAAGCTGAGAGAGACAGATTTTATAATGCCGAGGAAGGATTTTGCTGTGTGGGACTTATTATGCAAAGATGCTTCACTTCTGAAAGCTCAAGTTCATGAATGGAGTAATGGCCAAGATTTTGAAACTGTTCTTCTTCACTTGATTCACAAAATACGTTCAGATGAAAGCTCCTCTCAACCTGACGATGATTGCAAGAAGCTGGTTTCTTCTACAACTCTTGACCCTCTGCCTCAGCCTCTCCCTCTCTAA 801 0.4357 MAGIIVVFDFDLTILDCDSDYWVVDEFSATDLFNQLLPTMPLNSLMDRMLTEIHARGKTIEDIAQVLKRVPLHPRIVPAIKAAHALGCDLRIVSDANVFFIDTILENLEIKQCFTDIDTNPGFVDGEGRLKVLPYHDFTKSPHGCSLCPLNMCKGKIIERIRNSVLEKRMIYVGDGSGDYCPSLKLRETDFIMPRKDFAVWDLLCKDASLLKAQVHEWSNGQDFETVLLHLIHKIRSDESSSQPDDDCKKLVSSTTLDPLPQPLPL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0435 266 MobiDBLite consensus disorder prediction 238 266 - -
Lele44g0435 266 PIRSF PLP_phosphatas_PHOSPHO2 1 236 IPR016965 GO:0016791
Lele44g0435 266 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 196 IPR006384 GO:0016791
Lele44g0435 266 SUPERFAMILY HAD-like 5 184 IPR036412 -
Lele44g0435 266 Pfam Putative Phosphatase 4 232 IPR016965 GO:0016791
Lele44g0435 266 Gene3D - 2 188 IPR023214 -
Lele44g0435 266 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 240 IPR016965 GO:0016791
Lele44g0435 266 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0435 Lele-ChrLele44 3241874 3243458 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1102 39 19578512 19583599 Lele44g0435 44 3241874 3243458 CCT
Lele42g0922 42 21954674 21955960 Lele44g0435 44 3241874 3243458 hybridization