Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0433 ATGGCCAACTTAGCAAGTCCAACAGAGACTCATGATTGCAATGAGTTTGATGTATGTCATGGAAAGATAACACACACCTTTGATTGGATATACAGGGAATTTCTCATGGATTTTTTGATCAGAAAAAGCAATGCACGTGATAGCCACAGAAAGGGATGGATTTGTTCAGCTATCTCAGTCTGTTGTTCTCTTATAAGCATGTCTTATTTCATTAATGGACTGTGGTATCTTATTTCCAAATCTGAAGACTTTAGGCAGCTGACGTTGTTAGTTTACTTTTTCAGAGGACTAGTCTGGATTTCTCTAACAGTACCTTTGCTATTCAAGAGATCTAAATGTATACAAGTTCTAAACCTTGTTTGGTGGGTCTCTACATGCATACTCGTTTCAGCTCTCAATATTGAGATTCTGTTCAAAGATCATAACATTCAAATACTTGATCTGGTTCAATGGCCTTTACATTTATCACTTGTTTTTTGTGCCCTCCAAAGTCTTTATGTTGCATCTCATAGAACTCAAAATACCACTATATCAGAGCCTCTCTTAGCTCAAAAGGATGAAAATAAACAATCAAAACTTGCACGTGCCAATTTTCTCAGCAAAATGACTTTCTCGTGGATTAATTCCTTATTGAAATTGGGATTTTCAAAGCCATTTGCTCTTGAAGACATCCCATCTCTTGTTTCTGAAGATGAAGCTGCTTTAGCCTACCAAAAGTTTTCTCATGTATGGGATTCCTTTTTAAGGGATAGAAGCAAAAACAACAGTACTAAAAACTTGGTTATGTGGTCTATATTAAGAGTTTACATGAAAGAGAACTTTCTCGTAGCAATCCTGGCATTGCTCAGGACAATTGCTGTAGTAGTTTCTCCTTTGGTGCTCTATGCTCTTGTGAACTTTTCAAATAGTAAAGAGGAAAATCTAAAAGAGGGTCTTGTCATACTTTGTTGTCTGATTATATGCAAGGTAATTGAATCTTTGCCTCAAAGGCACTTCTATTTTCAATCGAGAAGGTCAGGAATGAGAATGAGATCAGCTTTAATGGTGGCAATACATAACAAGCAGTTGAAGCTTTCAAGTTCAGCCAGAAGAAGACACTCAACTGGGGAGATAGTGAATTACATAGCAGTTGATGCATATAGAATGGGACAATTTCCTTGGTGGTTTCACACCACATGGACTTCAGTAGTGCAACTTTTTCTATCTTTTGGGGTTCTATTTGGTGTTGTTGGTCTTGGTGCTCTTCTCGGTTTAGTCCCCATACTGATTTGTGGGCTTCTTAATATGCCCGTTGCAAAGATCATTCAAAAGTGTCTGTCAGAATTTATGGTTGCACAGGATGAACGTCTAAGATCAACTTCAGAGATCCTAAATAATATGAAAATCATAAAGTTGCAATCTTGGGAGGAAAAGTTCAAGACATCGGTGGAAACCCTACGTGCCAAAGAGTTCAAGTGGTTGACTAAGGCACAGTTCATAAAAGCTCATGGATCATTTATCTATTGGATGTCTCCAACGATTGTTTCCTCAGTAATCTTATTAGGATGTGCTCTTTTGAAAAGTGCCCCTTTAAATGCTGGAACCATATTCACTATTCTTGCTACTTTGAGGAGCATGAGTGATCCTGTTAGATTTATTCCAGAGGCTCTTTCTGTTATAATCCAAGTCAAGGTCTCCTTTGATCGTCTCAATACCTTTTTACTTGATGATGAGCTAAGTGATGACATCACTGGAAGACACTTATTGCAAAATTCAGTTAATAGTGTGGAAATTCAAGCAGGTAACTTCAGTTGGGATTCGGAATCGATGTCTCCAACTTTGAGAGATTTGAATGTGGAAATCAAACGGGGGCAGAAAACTGCAATTTGTGGACCAATTGGAGCCGGAAAATCATCCCTCATATGTGCAATACTTGGCGAGATACCCAAAATTTCAGGAACTGTGGGTGGAACCGTAGCCTATGTTTCTCAAACATCTTGGATCCAAAGTGGGACAATTCGCGATAATATACTCTTTGGCAAACCTATGGATGAAACCAGATATGAGAACGCCATAAAAGTATGTGCCTTGGATAAGGATATGAATGCTTTTAGCCATGGTGATCTTACAGAAATAGGTCAGCGAGGAATCAACTTGAGTGGAGGACAGAAGCAAAGGATTCAACTGGCTCGAGCAGTATATAATGATGCTGAAGTTTACCTCTTAGATGACCCTTTCAGTGCTGTGGATGCACATACTGCTGCTATTCTATTCAATGATTGTGTCTTGAATTCTCTAAGGAAGAAAACTGTAATTCTAGTGACTCATCAAGTGGAGTTTCTCTCACAAGTTGATAAAATCCTTGTCATGGAGGGTGGAGTAGTTACTCAATCTGGATGTTATGAAGATCTTCTGACAGAAGGGACAGCCTTTGAACAACTTGTAAATGCCCATAGAGAAGCAGTATCAGGGTCAGATCAAAACAATGAGATCCCTGGAGAATTTGAGGATGTGATAAATGTTATTCATCCATTGGAGTCTCATGAATTTCATCTCTCTGAGGATCATAAGACTGAGCAGGTTTCTACCGAAGTTCAGGTGTTACAACTTACAAAGGAAGAAGAAAAGGAGATTGGTAATGTTGGCTGGAAGCCATTCTGGGATTATCTTGATCTCTCCAATGGATCATTGCTTCTGGGTTTGAACATTTTATCAATGATGGCTTTTATTGGTTTGCAAGCAGTATCAACTTTTTGGCTTGCACTAGCCATAGAGGTTCCAAAAGTAACTAATGCCATCTTGATTGGAGTTTATACTATAGTTTCACTTATAAGCGTGGCGTTTGTGTGCATAAGATCTATTGTGGGTGCACATCTTGGATTAAAAGCTTCTACTTCTTTCTTCTCTTGTTTCAATAATGCTATCTTCAAGGCTCCTATGCTCTTCTTTGACTCAACCCCAGTTGGGAGAATTTTAACCCGTGCTTCATCGGATTTGAGTATATTAGACTTTGATATACCTTATGCACTCACCTTTGTAGTAGGTGGTGCAATAGAACTTCTGACAACAATTGGGATAATGGTTTTAGTCACGTGGCAAGTACTTATTGTTGCAGTTCCCGCCTTAATAACGTCTAAATACATTCAGGACTATTATCAAGCCGCTTCAAGGGAACTAACGAGAATCAATGGAACCACAAAAGCTCCAGTCATGAATTTCGCCACGGAGACATCACTAGGAGTGGTGACTGTGAGAGCTTTCAACATCGCAGACAGATTTTACCAAAATTACCTCAAGCTTGTGGACACAGATGCAAAACTTTTCTTTCATTCTAATGTGGCCACAGAATGGTTAATTTTAAGGATTGAAGCACTTCAGAATTTGACACTATTCACTGCAGCTTTACTGCTTGTTCTACTTCCAAAGGGACTTGTGTCCCCAGGCCTTGCAGGACTCTCTCTATCATACGCTTTGTCATTGTCAGAATGCCAAATTTTTCTTAGTACTTGGTTCTGTAATTTATCAAATTATATTGTTTCCGTTGAAAGAATTAAGCAGTTCATTCACATGCCAGAAGAGCCTCCTGCAATTGTGGAGAACAGAAAACCTCCTCTTTCATGGCCTTCCAAGGGTAGGATTGAGCTTCAAAATCTTGAGATAAGGTATCGTCCAAATGCTCCATTAGTCATTAAGGGAATCACATGTACGTTTAAAGAAGGAAGGAGAGTAGGAATTGTAGGGAGGACTGGAAGTGGAAAAAGTACACTTGTAAGTGCTCTGTTTCGGTTGGTTGATCCTGCAAGAGGTGATATTCTTATAGATGGGATCAGCATATTACCAATGGGTTTGAAGGATTTGAGGATGAAGCTCAGCATTATTCCTCAAGAACCCACTCTGTTCAAGGGCAGCATTAGAACCAACTTGGATCCTCTAGGCCTCTACTCTGATGATGAAATATGGAAGGCTTTAGAGAAATGCCAGCTCAAGACAACAGTCGTCAATCTACCAAATCAACTGGACTCTTCTGTGAGTGATGAAGGAGAAAATTGGAGTGTGGGACAACGCCAACTGTTTTGTCTTGGAAGAGCACTTCTCAAGCGGAATAGAATTCTTGTTCTTGATGAGGCTACTGCCTCTATTGATTCTACTACCGATGCCATTTTGCAACGAGTTATTAGACAAGAGTTTGCAAGATGTACAGTTATAACTGTGGCTCACAGAATTCCAACTGTTATAGATAGTGATATGATCATGGTTCTCTCTTATGGGAAAGTGGTGGAATATGATGAACCTTCAAAGCTTATGGAGACAAACTCTTCTTTCTCTAAACTTGTTTCTGAGTATTGGTCCAGCTGCTGCAAAAACTTCTCCCAAGTTCCAAATCATTAA 4368 0.3929 MANLASPTETHDCNEFDVCHGKITHTFDWIYREFLMDFLIRKSNARDSHRKGWICSAISVCCSLISMSYFINGLWYLISKSEDFRQLTLLVYFFRGLVWISLTVPLLFKRSKCIQVLNLVWWVSTCILVSALNIEILFKDHNIQILDLVQWPLHLSLVFCALQSLYVASHRTQNTTISEPLLAQKDENKQSKLARANFLSKMTFSWINSLLKLGFSKPFALEDIPSLVSEDEAALAYQKFSHVWDSFLRDRSKNNSTKNLVMWSILRVYMKENFLVAILALLRTIAVVVSPLVLYALVNFSNSKEENLKEGLVILCCLIICKVIESLPQRHFYFQSRRSGMRMRSALMVAIHNKQLKLSSSARRRHSTGEIVNYIAVDAYRMGQFPWWFHTTWTSVVQLFLSFGVLFGVVGLGALLGLVPILICGLLNMPVAKIIQKCLSEFMVAQDERLRSTSEILNNMKIIKLQSWEEKFKTSVETLRAKEFKWLTKAQFIKAHGSFIYWMSPTIVSSVILLGCALLKSAPLNAGTIFTILATLRSMSDPVRFIPEALSVIIQVKVSFDRLNTFLLDDELSDDITGRHLLQNSVNSVEIQAGNFSWDSESMSPTLRDLNVEIKRGQKTAICGPIGAGKSSLICAILGEIPKISGTVGGTVAYVSQTSWIQSGTIRDNILFGKPMDETRYENAIKVCALDKDMNAFSHGDLTEIGQRGINLSGGQKQRIQLARAVYNDAEVYLLDDPFSAVDAHTAAILFNDCVLNSLRKKTVILVTHQVEFLSQVDKILVMEGGVVTQSGCYEDLLTEGTAFEQLVNAHREAVSGSDQNNEIPGEFEDVINVIHPLESHEFHLSEDHKTEQVSTEVQVLQLTKEEEKEIGNVGWKPFWDYLDLSNGSLLLGLNILSMMAFIGLQAVSTFWLALAIEVPKVTNAILIGVYTIVSLISVAFVCIRSIVGAHLGLKASTSFFSCFNNAIFKAPMLFFDSTPVGRILTRASSDLSILDFDIPYALTFVVGGAIELLTTIGIMVLVTWQVLIVAVPALITSKYIQDYYQAASRELTRINGTTKAPVMNFATETSLGVVTVRAFNIADRFYQNYLKLVDTDAKLFFHSNVATEWLILRIEALQNLTLFTAALLLVLLPKGLVSPGLAGLSLSYALSLSECQIFLSTWFCNLSNYIVSVERIKQFIHMPEEPPAIVENRKPPLSWPSKGRIELQNLEIRYRPNAPLVIKGITCTFKEGRRVGIVGRTGSGKSTLVSALFRLVDPARGDILIDGISILPMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKALEKCQLKTTVVNLPNQLDSSVSDEGENWSVGQRQLFCLGRALLKRNRILVLDEATASIDSTTDAILQRVIRQEFARCTVITVAHRIPTVIDSDMIMVLSYGKVVEYDEPSKLMETNSSFSKLVSEYWSSCCKNFSQVPNH 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0433 1455 ProSitePatterns ABC transporters family signature. 712 726 IPR017871 GO:0005524|GO:0016887
Lele44g0433 1455 FunFam ABC transporter C family member 5 855 1187 - -
Lele44g0433 1455 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 896 1169 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele44g0433 1455 FunFam ABC transporter C family member 10 257 571 - -
Lele44g0433 1455 FunFam ABC transporter C family member 3 1189 1440 - -
Lele44g0433 1455 Pfam ABC transporter 607 739 IPR003439 GO:0005524
Lele44g0433 1455 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 274 555 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele44g0433 1455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 583 810 IPR027417 -
Lele44g0433 1455 Gene3D ABC transporter type 1, transmembrane domain 856 1187 IPR036640 GO:0005524|GO:0016020
Lele44g0433 1455 FunFam Multidrug resistance protein associated1 568 829 - -
Lele44g0433 1455 Pfam ABC transporter 1224 1371 IPR003439 GO:0005524
Lele44g0433 1455 CDD ABCC_MRP_domain1 589 786 - -
Lele44g0433 1455 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 194 1439 - -
Lele44g0433 1455 SUPERFAMILY ABC transporter transmembrane region 262 569 IPR036640 GO:0005524|GO:0016020
Lele44g0433 1455 Gene3D - 572 827 IPR027417 -
Lele44g0433 1455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1196 1439 IPR027417 -
Lele44g0433 1455 SUPERFAMILY ABC transporter transmembrane region 879 1188 IPR036640 GO:0005524|GO:0016020
Lele44g0433 1455 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 591 810 IPR003439 GO:0005524
Lele44g0433 1455 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1206 1440 IPR003439 GO:0005524
Lele44g0433 1455 Pfam ABC transporter transmembrane region 926 1150 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele44g0433 1455 Pfam ABC transporter transmembrane region 275 540 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele44g0433 1455 CDD ABC_6TM_ABCC_D2 896 1181 IPR044726 GO:0140359
Lele44g0433 1455 CDD ABC_6TM_ABCC_D1 275 563 IPR044746 GO:0140359
Lele44g0433 1455 SMART AAA_5 1232 1417 IPR003593 -
Lele44g0433 1455 SMART AAA_5 616 787 IPR003593 -
Lele44g0433 1455 CDD ABCC_MRP_domain2 1204 1424 - -
Lele44g0433 1455 Gene3D - 1189 1440 IPR027417 -
Lele44g0433 1455 Gene3D ABC transporter type 1, transmembrane domain 261 571 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0433 Lele-ChrLele44 3227269 3233442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0433 1185 1438 Calmodulin-binding Proteins AT2G36910 32.184 1.03e-33 140