Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0431 ATGCCGATGAGTCGAGAACAAGAGAAGCGAGGGAAGCAGGAAAAATGCTCCGATTCTGCTGAGAAGCTTATTGTTGCCGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTGGTTTGGGCTTTGACTCATGTTGTTCAACCTGGAGATTGCATCATAGTACTAGTAGTTGTTCCTTCACAAAGTTCAGGTAGAAGACTATGGGTTTTTCCGAGATTTGCTGGTGACTGTGCCAGTGGCCACAAGAAGGCTGCTTCAGGAACAACCTCAGAGCAGAAGTGTGATATTATCACCAATTCTTGTTCCCAGATGATCCTTCAGCTTCATGACGTCTATGACCCAAATAAGATAAATGTCAAGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTTGCTGCAGAGGCCAAGAAAGCCCATGTTAGTTGGGTCGTATTAGACAAACATCTTAAAAATGAGGAAAAACGGTGCATGGAAGAGCTGCAATGCAATATTGTGGTTATGAAGCATTCCCAACCAAAAGTACTCCGCTTGAATTTGGTTGGCTCGCGCAAAAAGGATCCTGAAGAAGCAGGCCAAGTACCTTCTGGGAAAGATGAGATGCATGGAAAGCAAACCAAAAAGAAGAATGATCGTTTGAATTCCATTAAAGGACCAGTCATCACTCCAACTAGCAGCCCAGAGTTGGGGACACCATTCACGGCAACTGAAGCGGGTACTTCATCAGTTTCAAGCTCCGATTTAGGAACATCACCATACTTCATCCCAGAGACAAATGGTGGTGAGTTGAAGAAAGAGGAAACAATCGAGGAAAATCAAGAACGTGATGATACTAACTCAGACACAGAGAGTGAAAATCTGTCCACGTCCTCAGCAAGTCTGAGATTCCAGCCATGGATCACAGAATTACTTCGACATCAACAATCGTCTCAGCTCACAGAAGAAAGACCAGAGAGACAAGATAGGCCTCATACATCTACAACCAGAGCTTTGCTAGAAAAGTTCTCGAAGCTTGATAGAGAAGCTGGAATTGATATCTCAGCCAGATGGACAACTGAGTTGGATTTTAGTGGAAATATGAGAGAAACAATAGCATTAACCAGAAACACCCCTCCTGGACCCCCTCCATTATGTTCAATATGTCAACACAAGGCACCTGTTTTCGGAAAGCCTCCAAAGTGGTTCAGCTATGCTGAGTTGGAGCTTGCAACCGGCGGATTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTACATAGAGGGGTTCTTCCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCCAGTTCTCAAGGTGATCTCGAATTTTGCTCTGAGGTTGAAGTCCTGAGCTGTGCTCAGCATCGAAATGTTGTGATGCTAATTGGGTTCTGTATAGAGGATAAGAGAAGGCTGCTGGTTTATGAGTATATATGCAATGGATCACTAGATTCTCATTTATATGGACGACAGCAAAAGCCATTAGAATGGTCAGCAAGACAGAAAATTGCAGTTGGAGCTGCCCGAGGGTTGCGATATCTCCATGAAGAGTGTAGAGTCGGTTGCATTATCCACCGTGATATGCGGCCAAACAACATCCTCATCACCCATGATTTTGAAGCACTGGTTGGCGATTTTGGACTAGCGAGGTGGCAGCCTGACGGAGAAACAGGTGTTGAAACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCAGAATATGCTAAAAGTGGACAAATTACTGAAAAAGCTGATGTTTATTCCTTTGGAGTGGTATTAGTGGAACTTGTTACGGGACGAAAAGCTGTGGATCTCACTCGACCCAAGGGACAGCAGTGTCTCACTGAGTGGGCACGCCCACTGTTGGAAGAATATGCCATAGAGGAACTGATTGATCCAAGGCTGGAAAATCGCTATTCAAGACATGAGGTCAATTGCATGCTGCATGCTGCATCATTATGCATTCGCCGTGATCCTCATTCTAGACCGCGCATGTCACAGGTTCTGCGAATACTGGAGGGCGACATGGTGATGGAAACAAATTACATTATTTCACATTCCGGCTATGATGTGGGAAATAGGAGCGGCCGAATCTGGGCGGGGCGGCACCACTGTAGTGGTCCATTGATAGAAGAGTCTCTGGAATCGTTCAGTGGGAAGAAGTCACTTGAGAAATACAGGACCTCCTCCCTTTGGAAAAGGGACAAGGTTAGGAGGACTGCACGTGAAGATATTGAAAGTGGTTTCCCCTACTTCTCACATTGA 2280 0.4491 MPMSREQEKRGKQEKCSDSAEKLIVAVKASKEIPKTALVWALTHVVQPGDCIIVLVVVPSQSSGRRLWVFPRFAGDCASGHKKAASGTTSEQKCDIITNSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKAHVSWVVLDKHLKNEEKRCMEELQCNIVVMKHSQPKVLRLNLVGSRKKDPEEAGQVPSGKDEMHGKQTKKKNDRLNSIKGPVITPTSSPELGTPFTATEAGTSSVSSSDLGTSPYFIPETNGGELKKEETIEENQERDDTNSDTESENLSTSSASLRFQPWITELLRHQQSSQLTEERPERQDRPHTSTTRALLEKFSKLDREAGIDISARWTTELDFSGNMRETIALTRNTPPGPPPLCSICQHKAPVFGKPPKWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQQKPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEALVGDFGLARWQPDGETGVETRVIGTFGYLAPEYAKSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLENRYSRHEVNCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMETNYIISHSGYDVGNRSGRIWAGRHHCSGPLIEESLESFSGKKSLEKYRTSSLWKRDKVRRTAREDIESGFPYFSH 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0431 759 CDD STKc_IRAK 413 679 - -
Lele44g0431 759 Gene3D Phosphorylase Kinase; domain 1 379 482 - -
Lele44g0431 759 Gene3D Transferase(Phosphotransferase) domain 1 483 691 - -
Lele44g0431 759 ProSitePatterns Tyrosine protein kinases specific active-site signature. 528 540 IPR008266 GO:0004672|GO:0006468
Lele44g0431 759 CDD USP_Like 22 149 - -
Lele44g0431 759 ProSiteProfiles Protein kinase domain profile. 407 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0431 759 MobiDBLite consensus disorder prediction 179 292 - -
Lele44g0431 759 MobiDBLite consensus disorder prediction 217 253 - -
Lele44g0431 759 PANTHER OS01G0750732 PROTEIN 299 691 - -
Lele44g0431 759 Pfam Protein tyrosine and serine/threonine kinase 411 676 IPR001245 GO:0004672|GO:0006468
Lele44g0431 759 MobiDBLite consensus disorder prediction 309 329 - -
Lele44g0431 759 FunFam Dual-specific kinase DSK1-like 14 169 - -
Lele44g0431 759 MobiDBLite consensus disorder prediction 307 329 - -
Lele44g0431 759 SUPERFAMILY Protein kinase-like (PK-like) 391 681 IPR011009 -
Lele44g0431 759 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 483 686 - -
Lele44g0431 759 MobiDBLite consensus disorder prediction 180 214 - -
Lele44g0431 759 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 379 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0431 Lele-ChrLele44 3200033 3203812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0431 387 748 Trihelix Transcription Factor Family AT1G70460 47.453 1.94e-102 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele44g0431 PK_Tyr_Ser-Thr 3.1e-42 CL0016