Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0419 ATGTTTCTAGAGACAGACTCAATTACTGTTCAGAAAAAGTTCCCTGGAATTAATGGTTTTACTGATGAAGACAGTGCTCCGAACACTCTAGTTATAGCAGACTGTGAGATTGTGAAGCCTAGGGTTGCATCAGAAGACATAAGAATGTTTTGTGAAGACTCTCGCTCCCCCCTTATCAGCAAGTACAAATCCATTATTCACCCCGGAGAGGTGAACAGGATCAGGGAAATGCCACAACATGATAATCTGTTAGTCACACATACAGACAGACCTGAGGTGATACTTTGGAATATTGACACACAGCCAGCTCGCCATGCTCTCCCTGGAGCTGAATATTCCTTGCCCAATCTGGTACTGCTTGGGCACACAGATATTGCTGAATTTGCTTTGGCTGTTTCTCCTTTTGAACCTTATGTTCTTTCTGGAGAGTTCTGTAGCGTCGGGGACGATTCTAAATTGATCGTATGGGATGATCGTTTTGGGTCAAATTATGTTCTCAAGGTCGATGGAGCTCATCTTGAGGAAGATATTCACTGTGTCGAATGGAATAAATTCAATTCTACTTATATTCTGACTGGGTCTGCTGATAGTTCAGTTCATATGTATGATCTTCGATACCTTGTCAATGCCCGTGGAAGTAATCCTGTTTTTACATTCCAGGGACATGATTCCTCTATCCTTTGTGTTCAGTGGTGCCCAGAAAGACGATCCGTATTTGGCACTTCGGGTGATGATGGGGTTATCAGCATTTGGGACTATGAAATGGTTGGGAGAGCTTCATCTTCTGATGGTCTGAGACAAGAAAGGGCTCCTCCTGGTTTATTCTTTCGACATGTTGGTCATAGGCACAAGGCAATTGAATTCCAGTGGAATCCTTCTGATCCTTGGACTATTGCTAGTCTGTCTCATGATTGCAGAGGCCGCGGAGGAGGTACCTTACAGATGTGGCGAATGATGGATATAATATATGAAGGGGTGGCGAATGAGGAGAGGGAAATGGCAGAGCTGAATATGTTCCGACCTTGTACTGTGGGACGAAGCCTATCATCTATCAAGGATTTATCAGCAGAAACAAAGTCGGCAGAAGCGAATTCATCTTCACCTGTGTCACAGTTTCTAGTCTCCGTTTGTTGTGTATCAGTGGCTCGTCGTTCCTTCATTCCATTGAAGCATCAAAAGAGGCAGACGAAGATGCCTACCGTCTCCGCTCCGACGATCACGTCTTTCATCTTCCTTCTCTTCATCTCATTCACCCACTCCTTCTACCTTCCCGGCGTTGCTCCTCGAGATTTTCATACTGATGAACCTTTGTCTGTTAAAGTGAACAAATTGTCATCTACGAAGACTCAACTTCCGTATGACTACTATTTCTTGAAGTATTGCAAGCCCCCGAAGATTGTGAACAATGCAGAAAATTTAGGAGAGGTTCTTCGAGGGGATCGCATTGAAAATTCAGTATATACGTTTAAAATGAGGAAGGAACAATCTTGTACTGTAGCTTGTCGGGTAACATTGGATGTTGAGTCTGCAAAGAATTTTCAAGAAAAAATTGATGATGAATATCGAGTAAACATGATTTTGGATAATCTTCCAGTTGCTGTTCTTAGACAGAGGAGGGATGGAGGTCAATCAACCACATATGAACATGGGTTTCGTGTTGGGTTCAAAGGAAACTATCAGGGGAGCAAGGAGGAGAAATATTTTATCAATAACCACCTGAGTTTTAGAGTCATGTATCATGAGGATCCTGAAACTGATTCTGCTCGTATTGTTGGGTTTGAAGTCACCCCAAACAGTATCAATCATGAATACAAGGAGTGGGATGAGAAGAATCCACAAGTTACAACATGCAATGAAGACACCAAGAATTTAATACAAGGTAGCACTGTCCCACAAGAAGTAGAAAAAAACGAGGATGTTGTTTTCACTTATGATGTTTCCTTCAAGAAAAGTGAAATCAAATGGGCATCTCGATGGGATACATATCTTCTAATGAATGATGACCAGATCCACTGGTTCTCCATCATTAACTCTCTGATGATTGTTCTTTTCCTTTCTGGAATGGTGGCAATGATCATGCTGAGAACTCTTTACAAAGACATTTCCAATTATAACCAGCTAGAAACCCAAGATGAGGCCCTGGAAGAGACAGGATGGAAACTTCTCCATGGAGATATTTTCAGGCCACCAAACAATTCGAATTTACTGTGTGTTTATGTTGGCACTGGCGTTCAGATCTTTGGAATGACACTTGTGACAATGGTATTTGCGTTGCTAGGATTCTTATCTCCATCCAATCGAGGAGGTCTTATGACAGCCATGGTTCTACTGTGGGTTTTTATGGGCTTAGGTGCTGGCTACTCCTCCGCACGTCTGTACAAAATGTTCAAGGGCACAGAATGGAAGAGGAATACCTTAAAAACTGCATTCATGTTTCCAGGCATTCTTTTCTCTGTATTCTTTGTTCTGAATGCTATAATTTGGGGGGAGCAGTCTTCTGGGGCAGTGCCTTTTGGAACAATGTTTGCTCTTGTTTGCCTCTGGTTCGGTATATCAGTGCCCTTGGTATTTGTGGGCAGTTACTTGGGTTTTAAGAAGCCAGCTATTGAAGATCCTGTGAGAACCAATAAAATTCCCAGGCAGATACCTGAGCAGGCATGGTATATGCAACCCATCTTCTCTGTTCTTGTCGGAGGCATTCTCCCATTTGGCGCCGTGTTCATTGAGCTCTTCTTTATCTTGACATCAATTTGGCTGAACCAATTCTACTACATTTTCGGCTTCCTTTTCATAGTGTTTGTCATTCTATTAATTACTTGCGCGGAGATAACAATCGTGCTGTGCTACTTCCAGTTGTGCAGCGAAGATTACAATTGGTGGTGGAGATCTTACCTCACTGCTGGGTCCTCTGCTCTGTACCTATTCCTTTACTCAATTTTCTACTTCTTTACCAAATTGGAGATCACAAAATTCGTGTCAGGCATTCTATACTTTGGGTATATGATAATTGTTTCGTATGCCTTCTTTGTTCTGACTGGGACTATTGGCTTCTATGCTTGCTTTTGGTTTGTCCGCAAGATCTATTCTTCTGTGAAGATTGACTGA 3105 0.4235 MFLETDSITVQKKFPGINGFTDEDSAPNTLVIADCEIVKPRVASEDIRMFCEDSRSPLISKYKSIIHPGEVNRIREMPQHDNLLVTHTDRPEVILWNIDTQPARHALPGAEYSLPNLVLLGHTDIAEFALAVSPFEPYVLSGEFCSVGDDSKLIVWDDRFGSNYVLKVDGAHLEEDIHCVEWNKFNSTYILTGSADSSVHMYDLRYLVNARGSNPVFTFQGHDSSILCVQWCPERRSVFGTSGDDGVISIWDYEMVGRASSSDGLRQERAPPGLFFRHVGHRHKAIEFQWNPSDPWTIASLSHDCRGRGGGTLQMWRMMDIIYEGVANEEREMAELNMFRPCTVGRSLSSIKDLSAETKSAEANSSSPVSQFLVSVCCVSVARRSFIPLKHQKRQTKMPTVSAPTITSFIFLLFISFTHSFYLPGVAPRDFHTDEPLSVKVNKLSSTKTQLPYDYYFLKYCKPPKIVNNAENLGEVLRGDRIENSVYTFKMRKEQSCTVACRVTLDVESAKNFQEKIDDEYRVNMILDNLPVAVLRQRRDGGQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHEDPETDSARIVGFEVTPNSINHEYKEWDEKNPQVTTCNEDTKNLIQGSTVPQEVEKNEDVVFTYDVSFKKSEIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFLSGMVAMIMLRTLYKDISNYNQLETQDEALEETGWKLLHGDIFRPPNNSNLLCVYVGTGVQIFGMTLVTMVFALLGFLSPSNRGGLMTAMVLLWVFMGLGAGYSSARLYKMFKGTEWKRNTLKTAFMFPGILFSVFFVLNAIIWGEQSSGAVPFGTMFALVCLWFGISVPLVFVGSYLGFKKPAIEDPVRTNKIPRQIPEQAWYMQPIFSVLVGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVILLITCAEITIVLCYFQLCSEDYNWWWRSYLTAGSSALYLFLYSIFYFFTKLEITKFVSGILYFGYMIIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0419 1034 ProSiteProfiles Trp-Asp (WD) repeats profile. 219 254 IPR001680 GO:0005515
Lele44g0419 1034 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 219 254 - -
Lele44g0419 1034 Pfam Endomembrane protein 70 452 991 IPR004240 GO:0016020
Lele44g0419 1034 SMART WD40_4 212 252 IPR001680 GO:0005515
Lele44g0419 1034 SMART WD40_4 112 157 IPR001680 GO:0005515
Lele44g0419 1034 SMART WD40_4 271 317 IPR001680 GO:0005515
Lele44g0419 1034 SMART WD40_4 162 203 IPR001680 GO:0005515
Lele44g0419 1034 SUPERFAMILY WD40 repeat-like 61 318 IPR036322 GO:0005515
Lele44g0419 1034 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 419 1034 IPR004240 GO:0016020
Lele44g0419 1034 Pfam WD domain, G-beta repeat 214 252 IPR001680 GO:0005515
Lele44g0419 1034 Gene3D - 9 334 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0419 Lele-ChrLele44 3106003 3121696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0419 419 1034 Miscellaneous Gene Families AT3G13772 87.338 0.0 1151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0969 41 19144441 19150516 Lele44g0419 44 3106003 3121696 hybridization
Lele42g0938 42 22090142 22097287 Lele44g0419 44 3106003 3121696 hybridization