Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0407 ATGGCATGTTCTTCTCAGTTTTCTGGCATAAAATATGATGTCTTTATCAGCTTCCGAGGCACAGACACACGCCATGGTTTTCTGAGTCATTTGAGGAGGGGATTGCAGCAGAAACAAATTGATGCCTACGTGGACGACAGACTTGAAAGTGGAGAACAAATATCACCGGCACTTATAAGAGCCATCAAAGAATCACTCATATCATTAATCGTATTTTCAAAGGATTATGCTTCTTCAAGGTGGTGTTTAGAAGAGCTGGTGCAGATTATTGAGTGTATGGAGAAGCAGAAACAGATGGTGATTCCTGTTTTCTATAACACAGATCCCTCACATGTGAGGAATCAAAAAGGGTCTTATGGAGATGCTTTTGTCAAACATGACAAAAATCACAAGGAAAAGGTGCCAATTTGGAAATCAGCTTTGAATAAAGCGGCTAATTTAGCTGGGTTTCATTCATCAAATTATGAGGACGAGGCTGAGCTTATAGAAGTAGTTGCCAAGTGTTTGTCAACAAGGTTGAATGAAATGTTCCAAAGTGACTTAACAGGCCTTGTTGGAATTGATGAAAGGATTGCAGATTTAGAATCACTAATGAACCAAGGCTCAGAAGATGTTCGAGTCATTGGAATTTGGGGCATGGGCGGTATCGGTAAGACAACTATGGCAACTGCAGTATTTAATAGAGTCTATTTGAAATATGAAGGATATTGTTTTTTGGCAAATGTGAGAGAAGAATCAGAGAATCATGGCATTATGTATTTGAAGAATAAAATTCTTTCTATACTACTTAAGGAAAATGATTTGAATATTGGTACACCAAATGGAATACCCCCTTATGTTAGGAGAAGGCTTCTTCGGAAAAGGGTTCTTGTTGTTCTTGATGATATTAGTGATTCTGATCAACTGGAAAATTTAGTGGGAGCTCTTGATTGCTTTGGATCTGGTAGTAGAATCATTATAACAACAAGGGATAGGCAAGTGCTAGCTAAAGGAGTTCATAAAATATACGAGGTTAAGCCATTGATGTTTGATGATGCTGCTCAACTTTTTATGTCAAATGCCTTTGAGAATAATTATCTAGACATGGAGTGGATTGAACTATCAAGGAAGGTGATTAGTTATGCTAAAGGCATTCCGTTGGCTTTGAAAGTTTTGGGTTCCTTTCTTTATGGTAAATGCAAGGAAGAATGGGAGAGCCAGCTTGAGAAGCTCAGCAAAATGCCACATGCAAAAGTTCAGGATGTGATGAGATTGAGTTTTGATAAACTAGATAGGGAAGAGAAGAATATTTTCTTGTATATTGCATGTTTCCTCAAAGGTTATAAATCACAGCAAATAGTAGTTTTACTAAATGCTTGTGGTTTTTCATCAATTATTGGGTTAAAAGTCCTTCGAGACAAAGCTCTTATCGCTGAAATCAAAGGATCAAACTCAGGAGCATCAAGAATATTTATGCATGATTTGATACAGGAAATGGGTTGGGAGATTGTTCGTGAAGAATCAATTCATGATCCTGAAAAACGTAGTCGATTATGGGATGCTAATGATATATATCGAGTATTGGAACATAACCTGGGGACTAAAGCCATTCAAAGCATAACTTTGAATGTGGCGAAAATTGAAGAGCTCTGCTTAACTCCTCAAGTCTTTGCTGAGATGTCTGAGCTAAAATTTCTTAGTTTTTCCCAGAATGATGTAGATGAACAAATCCTACGCCTTCCTCATGGCCTTGAATCTTTGCCAAACGAACTGAGATTCCTTCATTGGGATTGCTGTCCTTTAAAATCCTTACCTTCCACATTTCGTCCAGAAAGTCTCATTGAACTTAACATGACTTCGAGTCGTGTGGAAAAACTTTGGGATGGAGTTCTGCGTCTTGTGAATTTGAAGAAAATTGACCTCAGTAACTCCAAGCATCTACTGGAACTCCCAGATTTTTCTATGGCCAAAAATCTTGAAGAAGTTGAACTCTACAACTGTACAAGCTTGCGTAAGGTTCATCCTTCTATTTTAACCGTCGACAAGCTTCTGAAGTTGAACCTGTTATATTGCAAATCACTTACCTGCCTTAGAAGTGATGTCCATTTAAGATCCCTGAGTAACCTTTCTCTTGGTGAATGCTCAAGGCTCCAGGAATTCTCAGTGACATCAGAGAATATGAGGAACTTGAGTTTGGCCGGCACAGCTATCAATGAATTGCCTTCATCCGTGAGTTTTCTAAACAAACTTGAAACATTCGACTTGCAGCGTTGTAAAAACCTTAAGAATCTTCCAAACAAGTCAGCTAACCTGAGTTCTCTTCGAGAACTTCGGATATATGGTTGCATGCAGCTTGATGCATCGAATTTACACTTCCTACTTGATGGCTCAAGGTTCCTAGAAACATTGTTACTTCAAGATTGTCATAATTTATTTGAACTTCCAGACACCATCAGATTCTTATCCTCATTGAAGATTTTATCCCTAAATGAAACTGATATTGAGAGGTTGCCTGCAAGCATCAAGCATCTTCCACAGCTTGAAAAACTTGATTTGAGTAATTGTAGGAGGCTTCAGTCTATGCCTCATCTTCCACTAACCGTTAAAGAACTACACGTCACTAACTGCACTTCCCTGGAGAGAGTAATGTTTTCTTCAATGGCTGCTGATCATCTGAAGGAAAAAATACGAGTTAGCACTAGTTTCCAGAATTGCGTGAACTTGGATGCAAATTCACTCAGAGCTATAGGAGTAAATTCTCATGTCAACATTAAGAGATTGGCACATGAACAGTTATCAACTCTAGGGAAAAGTAAGATCCTAGATGGTCCAGTTGATGTTATTTATCCAGGAAGCAATGTTCCAGAGTGGTTCATCAAAAACAGGACAAGGCAGTCTTCAGTAACTATTGACTTATCTTCTGCTCCACCTTCCATGTTTCTGGGTTTCATTTTTTGTGCTGTTGTCTGTAAGTTCCCATCAAATGACAAGAACCTCGTCGGATGTGACTGCTACATGGAAATTAATGGTAAAAGGGACAAGAACATGGGTGCATGGACAAGCATATCTGCTTGTGAATTTATGTCTGATCACGTATGTCTGTGGTATGATGAACGATGTTGTCTGAAAACTAATGAAAGCAAGGAAGAAGATGAAACTAATAGCAAGAAAATATCATTTGAGTTCTCTGCACAAACTGGGAATATTTGGGAGAAGAAAAAGGATATTGTGATAAAAGAGTGTGGAGTCTGCCCCGTATATGCTTCAGAATATGACAAGTTCATTGAGGAAATGGAGTTGGAGTTGGAGTTGGAGTTGGAGTTGGAGTCAGAGCTTAAAGCAATTGAAATGGGAGTTATTGGAAGCTTTGATGAGAAGAAAAATGAGGAGACAATCCCTTTAGCTCAAAAATCCAATCAATATATCTTCCCACCACTTCCAAATGGAACTTGGAAGAAAGCAACACAAGGCTTAAAAGATCTCATCAACTTGTGA 3474 0.3851 MACSSQFSGIKYDVFISFRGTDTRHGFLSHLRRGLQQKQIDAYVDDRLESGEQISPALIRAIKESLISLIVFSKDYASSRWCLEELVQIIECMEKQKQMVIPVFYNTDPSHVRNQKGSYGDAFVKHDKNHKEKVPIWKSALNKAANLAGFHSSNYEDEAELIEVVAKCLSTRLNEMFQSDLTGLVGIDERIADLESLMNQGSEDVRVIGIWGMGGIGKTTMATAVFNRVYLKYEGYCFLANVREESENHGIMYLKNKILSILLKENDLNIGTPNGIPPYVRRRLLRKRVLVVLDDISDSDQLENLVGALDCFGSGSRIIITTRDRQVLAKGVHKIYEVKPLMFDDAAQLFMSNAFENNYLDMEWIELSRKVISYAKGIPLALKVLGSFLYGKCKEEWESQLEKLSKMPHAKVQDVMRLSFDKLDREEKNIFLYIACFLKGYKSQQIVVLLNACGFSSIIGLKVLRDKALIAEIKGSNSGASRIFMHDLIQEMGWEIVREESIHDPEKRSRLWDANDIYRVLEHNLGTKAIQSITLNVAKIEELCLTPQVFAEMSELKFLSFSQNDVDEQILRLPHGLESLPNELRFLHWDCCPLKSLPSTFRPESLIELNMTSSRVEKLWDGVLRLVNLKKIDLSNSKHLLELPDFSMAKNLEEVELYNCTSLRKVHPSILTVDKLLKLNLLYCKSLTCLRSDVHLRSLSNLSLGECSRLQEFSVTSENMRNLSLAGTAINELPSSVSFLNKLETFDLQRCKNLKNLPNKSANLSSLRELRIYGCMQLDASNLHFLLDGSRFLETLLLQDCHNLFELPDTIRFLSSLKILSLNETDIERLPASIKHLPQLEKLDLSNCRRLQSMPHLPLTVKELHVTNCTSLERVMFSSMAADHLKEKIRVSTSFQNCVNLDANSLRAIGVNSHVNIKRLAHEQLSTLGKSKILDGPVDVIYPGSNVPEWFIKNRTRQSSVTIDLSSAPPSMFLGFIFCAVVCKFPSNDKNLVGCDCYMEINGKRDKNMGAWTSISACEFMSDHVCLWYDERCCLKTNESKEEDETNSKKISFEFSAQTGNIWEKKKDIVIKECGVCPVYASEYDKFIEEMELELELELELESELKAIEMGVIGSFDEKKNEETIPLAQKSNQYIFPPLPNGTWKKATQGLKDLINL 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0407 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 434 IPR027417 -
Lele44g0407 1157 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 175 - -
Lele44g0407 1157 Pfam TIR domain 11 186 IPR000157 GO:0007165
Lele44g0407 1157 SUPERFAMILY L domain-like 485 884 - -
Lele44g0407 1157 Pfam NB-ARC domain 195 410 IPR002182 GO:0043531
Lele44g0407 1157 Gene3D Ribonuclease Inhibitor 499 717 IPR032675 -
Lele44g0407 1157 Gene3D Ribonuclease Inhibitor 718 909 IPR032675 -
Lele44g0407 1157 PRINTS Disease resistance protein signature 375 389 - -
Lele44g0407 1157 PRINTS Disease resistance protein signature 835 851 - -
Lele44g0407 1157 PRINTS Disease resistance protein signature 207 222 - -
Lele44g0407 1157 PRINTS Disease resistance protein signature 283 297 - -
Lele44g0407 1157 ProSiteProfiles TIR domain profile. 10 173 IPR000157 GO:0007165
Lele44g0407 1157 Pfam C-JID domain 942 1083 IPR045344 -
Lele44g0407 1157 Gene3D - 341 424 IPR042197 -
Lele44g0407 1157 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 150 IPR035897 -
Lele44g0407 1157 Gene3D - 8 174 IPR035897 -
Lele44g0407 1157 Gene3D - 175 335 IPR027417 -
Lele44g0407 1157 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 766 IPR044974 GO:0006952
Lele44g0407 1157 SMART till_3 11 147 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0407 Lele-ChrLele44 2983672 2987408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0407 6 850 WRKY Transcription Factor Family AT4G12020 33.139 1.58e-115 393