Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0406 ATGGCTATTGTTTGCCAGGGAACTGAAGCCATTCAAAGCATAAGTCTGGACATGTCAACAACTGGAGATTTGTCCTTAAATCCTCAAGTCTTTGCTAGGATGTACAAGCTGAAGTTTCTTAAACTTACTAGTCTCGTGAGGGATATCCCTTTGAAATCCCTTTGCTTACTCTGCCTAGCTTCCTGCTCAAGATTGAAGAAATTCTCAGTGACATCAGAGAACATGGGAGAGTTAGATTTATCAGAGACAACTATTGAGGAATTGCCATTATCCTTAGGATGTCTCAGTCAGCTTGAAACTGTATTTCTATGGCATTGTGAAAGTCTCAAGCCTCTTCCAAACAACTTACTTGGCCTGAGATCTCTGCGTTATCTTAAGTTCCCATTAAGCAGTTTTCTTGACTCCATAACTGTTCACTGCTTCAATGAAAACAATAATAATGATGGTGAGAGGCTTCATGTTAAGTCTTTGGACATTGTGTTACCTGGTAAAGAACTTAATTCAGATCATTTTGAAATGTGGAATGGCAGAGTTCAGTTTGGTTCAGTTGTTAAACTTCATTTCTCGCAGACTGATGACCAGCAAGTGCACTCATTGGTGATGATGAGAGAAATAGCCCGTGGGGTTGTCGATGATAGAGATAGAAAGGTGACAAAGAATGACGTGATTAGTGCTTTGCGCAACAGTATCGAGAAAATGGTTCATAAAGCTTCTTCAATGAATAAAACATTATGGACCATATGCCAATCTGGTGTCTCAATTGACTTAGTACAGTTTGCAGTTTTGAGGATGAAAGAAATTGCACATGGGATTTCTGATAAACAAGCAAGAGGAGCAATAACTAGGCGTGCCATAATTGCAGAACAAGTTGGAGTTGGTTATGATGGGATAGGATATAGTCCCATGGCTGAGTCAGCAAAGACCAGCAATGGTGATGTCCTGATAGATGAGGGACAAGGCATGATAAATGAAAATGAGATGTTCGAGGTAGAACATGTTTTAGGACTTGAAAATGGAATAAATGAAGTACAGGAGTCCCCGTTGCAATCTTCCTTTCAGCAATTTCTTCTGTGGCCTCCAGATGATTGCATTACCTTAGAGTGGGTTCAAGACATGATGTTCACCCTTGAGCAGGCTTCACAGAAGATGTTGCCATCTGAGTTCTGCCACGTCATACCATCGATGCTGGTAGATAAATTGACAGATTCTGCTCGCAGCATACTATGCAAAGAAACTAACTGTGTGGAGATCAATTGTCAAGGAGAAGATTCAAGGGTCATTGTAGTAGGCGACATCCATGGGCAGTTTTATGATTTACTCTTTCTTTTTAAGCATATTGGCATACCTTCTGAGAGCCAGATCTATGTTTTCAATGGAAATTATGTAGATAAAGGAGCATGGGGCATGGAGGTCTTGATGCCTCACAGAGTATATCTACTCCGTGGAAATCATGAATCAAGATATTGTGCTGCAAGATATGGTTTTAAGAAGGAGGTGCGGATGAAATATGGTGGCCAAGGTGAAGATGTATATAACAAATGCCTAGAGTGTTTCAAGGAACTTCCATTAGCTTCAGTTATAGGCGGCTGTGTTTATACTACTAATGGAGGGCTTTTTCGTAGCATAAAAGATGCTCCTTTGAGAAAGCCAAAGCGAAAGAAAACGCAAAGAGTGGATCTTGGATCTTTAACTGAGTTATCTGAAGTTAAAAGATCTTCTGTAGATTGCCCTTATGAAGGTCCTAACATATTGTTGAGTGACATTCTTTGGTCAAAACCATCTAATAAGGATGGCCTGAGGGATAATACAGGTCGGAAATTAGGTCTATTGTGGGGTCCGGATTGCACTGAGACTTTCTTAAAACAGAACAAATTGAAGCTGATCATCAGATCACATGAAGGACCCGATGCAAGGGTTGGTCAGGATGATTTTGGGGATATGTTGTGTGGATACAGCTTGGATCATGATGGAGAATCAGGAAAATTATATACACTTTTCAGTGCTCCTGACTTCCCTCAGTTTGATAAGAGGAGATATAACAATGAAGGAGCATATGCAATATTGAAGGCGCCTGATTTTCAAAGTCCTAGTTTTCACTCATTAAAATCTGCAGATAGACCAAAGGTGGATCCTTATATTGATTATGATGCACTAGACTCTCCGCAAATGAATGCACAGGCCTCAACCTCTGGTATTTCAGCTTCTCAAAGATCTTATCCAGCAGGGGTGATGCCGGAGTTTGACTTTGCAGCATTGGGCATTTATAATGCCCCATCTTGGAGTGTTCAGCTTCCTGATGGTTCAGGGGGTACCCAAGTTGTGCAGGTTCCAAGGGCTCCTGTGGTGGAAGGACTGCCTCTTCCTCAAAACATACAGGAACCTCACAAGGCTGCTTATGAGTATTTGTTTGAGCTCGTTGCTTCCTTAAAACTTATGCTTATGACAAGGGTGGGTTTAGATGTTTCTTTATAA 2472 0.4098 MAIVCQGTEAIQSISLDMSTTGDLSLNPQVFARMYKLKFLKLTSLVRDIPLKSLCLLCLASCSRLKKFSVTSENMGELDLSETTIEELPLSLGCLSQLETVFLWHCESLKPLPNNLLGLRSLRYLKFPLSSFLDSITVHCFNENNNNDGERLHVKSLDIVLPGKELNSDHFEMWNGRVQFGSVVKLHFSQTDDQQVHSLVMMREIARGVVDDRDRKVTKNDVISALRNSIEKMVHKASSMNKTLWTICQSGVSIDLVQFAVLRMKEIAHGISDKQARGAITRRAIIAEQVGVGYDGIGYSPMAESAKTSNGDVLIDEGQGMINENEMFEVEHVLGLENGINEVQESPLQSSFQQFLLWPPDDCITLEWVQDMMFTLEQASQKMLPSEFCHVIPSMLVDKLTDSARSILCKETNCVEINCQGEDSRVIVVGDIHGQFYDLLFLFKHIGIPSESQIYVFNGNYVDKGAWGMEVLMPHRVYLLRGNHESRYCAARYGFKKEVRMKYGGQGEDVYNKCLECFKELPLASVIGGCVYTTNGGLFRSIKDAPLRKPKRKKTQRVDLGSLTELSEVKRSSVDCPYEGPNILLSDILWSKPSNKDGLRDNTGRKLGLLWGPDCTETFLKQNKLKLIIRSHEGPDARVGQDDFGDMLCGYSLDHDGESGKLYTLFSAPDFPQFDKRRYNNEGAYAILKAPDFQSPSFHSLKSADRPKVDPYIDYDALDSPQMNAQASTSGISASQRSYPAGVMPEFDFAALGIYNAPSWSVQLPDGSGGTQVVQVPRAPVVEGLPLPQNIQEPHKAAYEYLFELVASLKLMLMTRVGLDVSL 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0406 823 Pfam Calcineurin-like phosphoesterase 425 635 IPR004843 GO:0016787
Lele44g0406 823 PRINTS Serine/threonine phosphatase family signature 455 482 IPR006186 GO:0016787
Lele44g0406 823 PRINTS Serine/threonine phosphatase family signature 661 677 IPR006186 GO:0016787
Lele44g0406 823 PRINTS Serine/threonine phosphatase family signature 425 452 IPR006186 GO:0016787
Lele44g0406 823 Gene3D - 361 738 IPR029052 -
Lele44g0406 823 Gene3D Ribonuclease Inhibitor 8 274 IPR032675 -
Lele44g0406 823 SUPERFAMILY L domain-like 15 131 - -
Lele44g0406 823 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 198 811 - -
Lele44g0406 823 SMART pp2a_7 392 705 IPR006186 GO:0016787
Lele44g0406 823 SUPERFAMILY Metallo-dependent phosphatases 387 711 IPR029052 -
Lele44g0406 823 ProSitePatterns Serine/threonine specific protein phosphatases signature. 480 485 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0406 Lele-ChrLele44 2974205 2980641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0406 356 627 Calmodulin-binding Proteins AT5G63870 50.172 1.92e-89 283