Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0396 ATGGCTCGCGGGAGAATAAGGGCAAGAATACGGATTAGCAATCTTTACACATTTGCTTGCCTTCGACCCAGAACCACTGAGGAGGGGGCCCATTCCCTTGAAGGCCCAGGGTTCTCACGAACTGTGCACTGCAACCAACCTCACCTACATGAAAAGAAACCTCTCCGTTACTGCCAGAATCATATATCGACTACAAAATATAATGTTATCTCATTTTTGCCCAAGGCTCTCTTTGAGCAATTTCGACGGGTTGCTAATATATATTTTCTTTTGGCTGCTTGCCTATCGGTCTCTCCAATTTCACCCTTTACACCAGTGAGCATGATTGCTCCTTTGGCATTTGTTGTAGGGCTTAGTATGGCAAAGGAGGCACTGGAAGATTGGCGGAGGTTTCTTCAGGATGTCAAAGTTAATCGTCGGAAAGTTACTGTCCATAAAGGGGATGGTGTTTTTTATTTGAAGGCATGGCAGAAGATAAGGGTTGGAGATGTGGTAAAAGTAGAAAAGGATCAATTTTTCCCTGCTGACTTGCTTCTGTTGTCATCAAGTTTTGATGATGGTATATGCTATGTGGAAACTATGAATTTAGATGGTGAAACGAACTTGAAAGTGAAGAGATCTCTGGAGGTTACCTTGCCTCTTGACAATGATGGCGCTTTTAAGGATTTTACAGGAACAATAAAATGTGAAGACCCAAATCCCAATCTTTATACATTTGTTGGTAACGTTGAGTATGAACGTCAGGTTTATCCCATTGATCCTATTCAAATTCTCCTCCGAGATTCAAAGCTGAGAAACACTGATCATGTCTATGGGGTGGTCATTTTCACTGGTCATGACAGCAAAGTGATGCAGAATTCTACAAAATCCCCTTCAAAAAGGAGCATGATAGAGAAGAAGATGGATTATATCATATATCTTCTTTTCACGGTCCTTATTTTAATATCTATGATAAGTTCCATAGGATTTGCTATAAAAACCAAGTTTCAAACTCCAGACTGGTGGTACTTACAGCCCAAGGTAGCTGAGTACCAATATAATCCCGACAATGCTAGCTTGGCTGGGATGAGCCATCTTATTACTGCGCTCATTCTTTATGGGTATTTGATACCCATATCACTCTATGTGTCAATTGAGCTTGTGAAGGTTCTACAAGCAAGGTTCATCAACAAAGACTTGCAAATGTTTGATGAAGAAACTGGGACTCCAGCTGATGCACGAACTTCAAATTTGAATGAAGAGCTTGGTCAGGTAGACACTATCCTTTCTGACAAGACTGGCACTTTAACCTGCAATCAGATGGATTTTTTGAAATGCTCCATTGCTGGTACAACATATGGAGTACGCTCCAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCCTCTGACTTTGAGGAGCAGGAGTCAGATCTCTCAAATTTTCCCATGCCTAAGAATAAAACACGTGGTTTGAATGAAAACAATAGAATAGGTGATGAAATTGAAATGGAGCCTGTTGTTACTTCTAAGAGTGATGAAAATAGAAAGCCTTCCATAAAGGGATTTAATTTTGAGGATAACAGGATCATGAACTGCAACTGGTTCAAAGAGGCCAATTCTGGTGTTCATTTGTTGTTTTTCCGGATATTGGCAGTTTGCCATACTGCCATTCCTGAGCTGAATGAGGAGACTGGCAGTTTTACATATGAAGCTGAGTCACCTGATGAGGGGGCTTTTCTTGCAGCAGCCAGAGCATTTGGTTTTGAGTTTTGTAAAAGGAATCAGTCGAGTATTTTCATCCGTGAAAGACTGTCTCCTTCTGGACAACCAGTTGAAAGGGAGTACAAAATCCTGAATTTGTTGGACTTCACCAGTAAAAGAAAACGGATGTCTGTGGTTGTACGTGATGAGGACAGCAACATTCTTCTTATGTGCAAGGGAGCAGACAGTATCATATTTGATCGATTGTCAAAGAATGGAAAAACATATTTGGAGGCTACTACTAGACATTTACATGAATATGGAGAATCTGGTTTGCGAACACTAGCCTTGGCTTATAGAAAACTAGATGAGCAAGAGTACTCTGCTTGGAATAATGAATTCCAGAAAGCCAAAGCAGCTGTTGGGTCTGACCGAGAGGAAACACTTGAACGATTATCAGATGTAATGGAGAGAGAGTTGATTCTTGTTGGAGCTACTGCTGTTGAAGACAAACTGCAGAAAGGGGTGCCCCAATGCATTGACAAACTTGCACAAGCTGGTCTTAAGATCTGGGTGTTAACTGGAGATAAGATGGAAACTGCAATCAACATTGGATTCTCTTGTAGTTTACTTCGACAGGGCATGAAGCAGATATGTATAACTACTATGAACACAGATTCATTAACCAACAGTGGAAAAGAGGCCATCAAGGAGAATATTTTGAACCAAATAACCAATGCCTCACAAATGATCAAGCTGGAGAAAGATCCCCATGCTGCATTTGCATTAATTATTGATGGTAAAACTCTGACATATACATTAGAAGATGATATTAAGCACCAGTTTTTGGGATTGGCAGTGGAATGTGCATCTGTCATCTGCTGTCGCGTGTCTCCCAAGCAAAAGGCGCTGGTAACAAGGTTGGTGAAGGAAGGAACTGGGAAGACCACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCAGACATTGGTGTTGGTATTAGTGGAGTTGAAGGTATGCAGGCAGTGATGGCCAGTGACTTTGCCATCGCCCAATTTCGGTTTTTGGAGCGTCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGCTACTTTTTCTACAAAAATATAGCATTTGGCCTGACCATATTCTATTTTGAGGCCTTTACGGGTTTCTCCGGGCAATCAGTTTACGATGACTGGTACATGTTACTGTTCAACGTTGTTCTTACGTCATTACCTGTCATCTCACTTGGTGTCTTTGAACAAGATGTTTCATCAGAAGTTTGCTTGCAGTTTCCTGCACTTTACCAGCAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGAAATGGTCTCTATTCCTCCCTTATCATCTTCTTCCTCAACGTCATCATCTTCTACGATCAAGCATTCCGTGTCAATGGCCAGACTGCTGACATGGCTGCTGTCGGTACGACAATGTTCACTTGCATCATTTGGGCTGTCAATCTTCAGATTGCCCTGACAATGAACCATTTTACCTGGATCCAACACCTATTGGTCTGGGGCAGTGTAACATCATGGTACCTATTTCTCTTGCTGTATGGCATGATTTCTCCATACTATTCCAAGAATGCCTACCAAATACTAGTTGAAGCTCTTGGCCCTGCACCTCTTTATTGGATAGCAACCATTTTAGTAACAGTCACTTGCAATCTTCCTTATCTCACCCACATTTCCTTCCAAAGATGTTTTAATCCCATGGATCATCACATCATCCAAGAAATTAAGTATTATAAGAAGGATATTGAAGATCAAAACATGTGGACTAGGGAAAGGTCTAAGGCCAGACAAGAGACAAAGATTGGTTTCACAGCAAGAGTTGAAGCCAAGATCAGGCAGTTGAAAGGAAGGCTGCAGAAGAAGCAATCATCTATGGGCGCTCTGTCGCCATCAAGAAACTTATAA 3684 0.4148 MARGRIRARIRISNLYTFACLRPRTTEEGAHSLEGPGFSRTVHCNQPHLHEKKPLRYCQNHISTTKYNVISFLPKALFEQFRRVANIYFLLAACLSVSPISPFTPVSMIAPLAFVVGLSMAKEALEDWRRFLQDVKVNRRKVTVHKGDGVFYLKAWQKIRVGDVVKVEKDQFFPADLLLLSSSFDDGICYVETMNLDGETNLKVKRSLEVTLPLDNDGAFKDFTGTIKCEDPNPNLYTFVGNVEYERQVYPIDPIQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSMIEKKMDYIIYLLFTVLILISMISSIGFAIKTKFQTPDWWYLQPKVAEYQYNPDNASLAGMSHLITALILYGYLIPISLYVSIELVKVLQARFINKDLQMFDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTTYGVRSSEVELAAAKQMASDFEEQESDLSNFPMPKNKTRGLNENNRIGDEIEMEPVVTSKSDENRKPSIKGFNFEDNRIMNCNWFKEANSGVHLLFFRILAVCHTAIPELNEETGSFTYEAESPDEGAFLAAARAFGFEFCKRNQSSIFIRERLSPSGQPVEREYKILNLLDFTSKRKRMSVVVRDEDSNILLMCKGADSIIFDRLSKNGKTYLEATTRHLHEYGESGLRTLALAYRKLDEQEYSAWNNEFQKAKAAVGSDREETLERLSDVMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITTMNTDSLTNSGKEAIKENILNQITNASQMIKLEKDPHAAFALIIDGKTLTYTLEDDIKHQFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMLLFNVVLTSLPVISLGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFFLNVIIFYDQAFRVNGQTADMAAVGTTMFTCIIWAVNLQIALTMNHFTWIQHLLVWGSVTSWYLFLLLYGMISPYYSKNAYQILVEALGPAPLYWIATILVTVTCNLPYLTHISFQRCFNPMDHHIIQEIKYYKKDIEDQNMWTRERSKARQETKIGFTARVEAKIRQLKGRLQKKQSSMGALSPSRNL 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0396 1227 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1167 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele44g0396 1227 MobiDBLite consensus disorder prediction 468 485 - -
Lele44g0396 1227 Gene3D - 432 463 IPR023299 GO:0000166
Lele44g0396 1227 Gene3D - 115 288 - -
Lele44g0396 1227 SFLD p-type atpase 405 932 IPR044492 -
Lele44g0396 1227 Gene3D - 419 431 IPR023214 -
Lele44g0396 1227 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1149 IPR023298 -
Lele44g0396 1227 Gene3D - 720 921 IPR023214 -
Lele44g0396 1227 MobiDBLite consensus disorder prediction 468 487 - -
Lele44g0396 1227 Pfam Cation transport ATPase (P-type) 546 651 - -
Lele44g0396 1227 SFLD C1.7: P-type atpase like 405 932 - -
Lele44g0396 1227 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1159 IPR032630 -
Lele44g0396 1227 Coils Coil 448 468 - -
Lele44g0396 1227 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Lele44g0396 1227 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Lele44g0396 1227 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 40 1183 - -
Lele44g0396 1227 SUPERFAMILY Calcium ATPase, transduction domain A 142 286 IPR008250 -
Lele44g0396 1227 Gene3D - 575 700 IPR023299 GO:0000166
Lele44g0396 1227 FunFam Phospholipid-transporting ATPase 118 288 - -
Lele44g0396 1227 FunFam Phospholipid-transporting ATPase 724 921 - -
Lele44g0396 1227 FunFam Phospholipid-transporting ATPase 591 722 - -
Lele44g0396 1227 SUPERFAMILY HAD-like 410 925 IPR036412 -
Lele44g0396 1227 CDD P-type_ATPase_APLT_Dnf-like 59 1040 - -
Lele44g0396 1227 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 853 962 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g0396 1227 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0396 Lele-ChrLele44 2902149 2908002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0396 1 1222 Primary Pumps ATPases AT1G17500 75.470 0.0 1946