Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0385 ATGGCCTCGTCTTCACTATTCCAGTCTTCTCCCTTCTCCTTCCAATGCAAACCCTCTCTTCCTCACCCATCACCCAAATCCAACTTCATATTCAACGCTCACTTCCAAAATGGATCCTCCAATCTTCTCCCTCACAACAACAACAACGCCTCGCCGCCAGTCCCACGGGCGGTTTCAAAGAACCGCCGCCCTGCCGACGAGAACATCCGCGATGAGGCTCGCCGCAAATCTGTCACTTACACACATCGATTCTCCGCCAAGTACGTCCCCTTTAATGCGGATCCTTCATCCACAGAATCCTACTCTCTTGACGAGATCGTGTATCGGTCCCAATCTGGTGGCCTTCTCGATGTTCAGCACGACATGGAAGCTCTGAAGAAATACGATGGTCAGTACTGGCGATCCCTGTTTGACTCTCGTGTGGGTAGAACCACCTGGCCGTACGGCTCTGGTGTTTGGAGCAAGAAGGAATGGGTGTTACCCGAGATCGACAATGACGACATCGTGAGTGCATTCGAAGGAAACTCAAATCTCTTCTGGGCTGAGCGTTTTGGAAAGCAGTTTCTGGGCATGAACGATTTGTGGGTCAAACACTGTGGGATCAGCCACACTGGGAGTTTCAAAGATCTGGGTATGACTGTTTTAGTGAGCCAGGTTAACAGGTTAAGAAAAATGAAACGTCCTGTTGTCGGTGTTGGTTGTGCCTCCACAGGGGACACCTCTGCTGCTTTATCTGCTTATTGTGCTTCTGCAGGAATCCCATCGATTGTTTTTTTGCCTGCTAATAGGATTTCCATTGCTCAACTGGTCCAGCCAATTGCAAATGGTGCATTTGTTTTGAGCATTGATACAGATTTTGATGGGTGTATGCATTTGATTAGGGAGGTTACTTCTGAGTTACCTATATACTTGGCTAATTCTCTGAACAGCTTGAGACTAGAAGGGCAGAAAACTGCAGCTATTGAGATTTTGCAGCAGTTTAATTGGCAAGTACCTGATTGGGTTATTGTACCAGGAGGGAATCTTGGAAACATCTATGCGTTCTATAAAGGGTTTAACATGTGCAAAGAGTTAGGACTAGTTGATAGGATTCCTAGACTTGTTTGTGCTCAAGCAGCAAATGCTAATCCTCTCTATCAGTACTTCAAGTCAGGGTGGAAAGAATTTAAGCCTGTAAAGGCCAACACTACATTTGCATCTGCCATACAAATTGGTGATCCTGTTTCAATAGATAGAGCTGTTTATGCACTGAAGAACTCAAATGGCATTGTTGAGGAAGCAACAGAAGAAGAACTAATGGATGCTACGGCTCAAGCGGATTCTACTGGCATGTTTATATGCCCTCATACTGGGGTTGCTTTGACCTCATTGATTAAATTAAGGAAAAAGGGGACCATAGGGCCTACAGATAGGACTGTGGTAATCAGTACTGCTCATGGGTTGAAGTTTACACAATCGAAAATTGATTACCATTCAAAAGATATTGAGGGCATGGCTTGCAAATTTGCTAACCAACCAGTGCAAGTGAAGGCGGATTTTGGGTCAGTTATGGATGTTTTGAAGAAGTATTTGCACAGTAAGGCGCTAAAACACTAG 1596 0.453 MASSSLFQSSPFSFQCKPSLPHPSPKSNFIFNAHFQNGSSNLLPHNNNNASPPVPRAVSKNRRPADENIRDEARRKSVTYTHRFSAKYVPFNADPSSTESYSLDEIVYRSQSGGLLDVQHDMEALKKYDGQYWRSLFDSRVGRTTWPYGSGVWSKKEWVLPEIDNDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMHLIREVTSELPIYLANSLNSLRLEGQKTAAIEILQQFNWQVPDWVIVPGGNLGNIYAFYKGFNMCKELGLVDRIPRLVCAQAANANPLYQYFKSGWKEFKPVKANTTFASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDATAQADSTGMFICPHTGVALTSLIKLRKKGTIGPTDRTVVISTAHGLKFTQSKIDYHSKDIEGMACKFANQPVQVKADFGSVMDVLKKYLHSKALKH 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0385 531 Gene3D - 284 531 IPR036052 -
Lele44g0385 531 CDD Thr-synth_1 153 483 - -
Lele44g0385 531 FunFam Threonine synthase 1, chloroplastic 268 528 - -
Lele44g0385 531 TIGRFAM thrC: threonine synthase 158 482 IPR004450 -
Lele44g0385 531 MobiDBLite consensus disorder prediction 40 55 - -
Lele44g0385 531 Gene3D - 63 283 IPR036052 -
Lele44g0385 531 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 198 212 IPR000634 GO:0006520|GO:0030170
Lele44g0385 531 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 61 525 IPR036052 -
Lele44g0385 531 MobiDBLite consensus disorder prediction 40 72 - -
Lele44g0385 531 Pfam Pyridoxal-phosphate dependent enzyme 171 477 IPR001926 -
Lele44g0385 531 PANTHER CYSTATHIONINE BETA-SYNTHASE 169 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0385 Lele-ChrLele44 2813030 2814625 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g1012 41 19441731 19443323 Lele44g0385 44 2813030 2814625 hybridization
Lele42g0980 42 22442182 22443777 Lele44g0385 44 2813030 2814625 hybridization