Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0382 ATGGGAGTTCTGCCACAACAACGTCATAGTACCAAGACATTGAGTTTCCAGTTTCAAGATCAGGATTCATCTTCTACTCAATCGACTGATCAATCTTATCCGGAAGTTGATTCAGCTCAATCAGGTCAAATTTCTATCCCGTATAGCAATTCTTCGGCACATTCAAAATGTAGTGCAAGTGGAGGGGGTCTCATCAGGTCATCATTGGGGAGTCAGAGTCTTTGTTTTCCTCCATTCCAAGTGGATCATAACCAATCAATTGCTCATATTGCATTTCACCATGCTGAACCATGCTTTGATGGTGTACTTGCTGCATATGGGCCACAGTCCAAGATTCATCAGGCCCAACTCATGGGATTAACTTCTGTTCGAGTTCCTCTTCCTTTTGATCTGACAGAAGAACCGATATACGTGAATGCAAAGCAGTACCATGCTATTCTGAGGCGTAGACAGTATCGTGCCAAACTCGAAGCACAGAACAGACTCATCAAAGCTCGGAAACCATATCTTCACGAGTCCCGACATCGGCATGCATTGAGGAGGGCTAGAGGTTCTGGGGGTCGCTTTCTCAACAGCAAACAACTCCAGGAAGCAAGCCTCAAAACAGACAGTCGAGGCCTGAAAGTTTCGGAAGGTACTATGTTGAACCTAGGTGGAGGAAATATGTCAGAATCCAAAAATCATGGTGATGTAGAAAACTACAGAGATGGTTCTGACATCACAAGTGCTTCCCATAGCGATGGCATGTTCCAGCAACATGAGTCCAGCTTCAGGCTCTCTAGTTACCCTCCTCACATTGGATGGAACATGAAAGGCTACTCAGCCGATCCCCGCGGCACTTGTGGTGGTGGCGGCGGGAATCAACAGCATGTGTCTGTTCTCATGTGA 888 0.4628 MGVLPQQRHSTKTLSFQFQDQDSSSTQSTDQSYPEVDSAQSGQISIPYSNSSAHSKCSASGGGLIRSSLGSQSLCFPPFQVDHNQSIAHIAFHHAEPCFDGVLAAYGPQSKIHQAQLMGLTSVRVPLPFDLTEEPIYVNAKQYHAILRRRQYRAKLEAQNRLIKARKPYLHESRHRHALRRARGSGGRFLNSKQLQEASLKTDSRGLKVSEGTMLNLGGGNMSESKNHGDVENYRDGSDITSASHSDGMFQQHESSFRLSSYPPHIGWNMKGYSADPRGTCGGGGGNQQHVSVLM 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0382 295 MobiDBLite consensus disorder prediction 1 45 - -
Lele44g0382 295 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 134 189 IPR001289 GO:0003700|GO:0006355
Lele44g0382 295 ProSiteProfiles NF-YA/HAP2 family profile. 132 192 IPR001289 GO:0003700|GO:0006355
Lele44g0382 295 Gene3D - 132 193 - -
Lele44g0382 295 ProSitePatterns NF-YA/HAP2 subunit signature. 137 157 IPR018362 GO:0003677|GO:0016602
Lele44g0382 295 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 8 254 IPR001289 GO:0003700|GO:0006355
Lele44g0382 295 SMART cbf3 131 192 IPR001289 GO:0003700|GO:0006355
Lele44g0382 295 PRINTS CCAAT-binding transcription factor subunit B signature 135 157 IPR001289 GO:0003700|GO:0006355
Lele44g0382 295 PRINTS CCAAT-binding transcription factor subunit B signature 166 189 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0382 Lele-ChrLele44 2799439 2802184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0382 86 293 CCAAT-HAP2 Transcription Factor Family AT1G17590 49.083 6.05e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Lele44g0382 CBFB_NFYA 3.8e-26 No_clan